EcoCyc is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of its genome, and of transcriptional regulation, transporters, and metabolic pathways.

Prefix

ecocyc

Keywords

biology

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

AICARTRANSIMPCYCLO-CPLX   Resolve

Example CURIE

ecocyc:AICARTRANSIMPCYCLO-CPLX

Publications

• 2021 The EcoCyc Database in 2021
• 2016 The EcoCyc database: reflecting new knowledge about Escherichia coli K-12
• 2014 The EcoCyc Database
• 2012 EcoCyc: fusing model organism databases with systems biology
• The EcoCyc Database.

Contributors

• contributor Chris Mungall   0000-0002-6601-2165   cmungall

A summary of the relations in the Bioregistry schema can be found here.

In Collection

Global Biodata Coalition - Global Core Biodata Resources

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 5 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE ecocyc:AICARTRANSIMPCYCLO-CPLX is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.