AmiGO 2: Term Details for "catalytic step 2 spliceosome" (GO:0071013)

Notice

Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page.

Term Information

Accession: GO:0071013
Name: catalytic step 2 spliceosome
Ontology: cellular_component
Synonyms: mammalian spliceosomal complex C, mammalian spliceosomal complex C1, yeast spliceosomal complex A2-2
Alternate IDs: None
Definition: A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. Source: GOC:krc, PMID:19239890, GOC:ab, ISBN:0879695897, GOC:mah, PMID:18322460, ISBN:0879697393
Comment: None
History: See term history for GO:0071013 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to catalytic step 2 spliceosome (excluding "regulates").; Link to all direct and indirect annotations to catalytic step 2 spliceosome (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for catalytic step 2 spliceosome (excluding "regulates").

Include "regulates"
For more information, please see the ontology relation documentation.

Filter results

View this term in QuickGO.

Additional external viewing options

OLSVis (interactive)

Additional internal viewing options

CARO:0030000 biological entity
CARO:0000000 anatomical entity
UBERON:0001062 anatomical entity
GO:0008150 biological_process
CARO:0000006 material anatomical entity
GO:0008152 metabolic process
GO:0044237 cellular metabolic process
GO:0009987 cellular process
CARO:0000003 connected anatomical structure
UBERON:0000465 material anatomical entity
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
UBERON:0000061 anatomical structure
GO:0009058 biosynthetic process
GO:0006725 cellular aromatic compound metabolic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0005575 cellular_component
GO:0046483 heterocycle metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:0044238 primary metabolic process
CL:0000000 cell
GO:0110165 cellular anatomical entity
GO:0044249 cellular biosynthetic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0005622 intracellular anatomical structure
GO:0009059 macromolecule biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:0043226 organelle
GO:0010467 gene expression
GO:0043229 intracellular organelle
GO:0043227 membrane-bounded organelle
GO:0016070 RNA metabolic process
GO:0003824 catalytic activity
GO:0043231 intracellular membrane-bounded organelle
GO:0006396 RNA processing
GO:0140640 catalytic activity, acting on a nucleic acid
GO:0003674 molecular_function
GO:0005634 nucleus
GO:0032991 protein-containing complex
PR:000050567 protein-containing material entity
GO:0008380 RNA splicing
GO:0140098 catalytic activity, acting on RNA
GO:0140513 nuclear protein-containing complex
GO:1990904 ribonucleoprotein complex
GO:0000375 RNA splicing, via transesterification reactions
GO:1902494 catalytic complex
GO:0000386 second spliceosomal transesterification activity
GO:0005681 spliceosomal complex
GO:0071013 catalytic step 2 spliceosome
GO:0071018 U12-type catalytic step 2 spliceosome
GO:0071007 U2-type catalytic step 2 spliceosome

Parents of catalytic step 2 spliceosome (GO:0071013)

subject	relation	object
catalytic step 2 spliceosome	is_a	spliceosomal complex (GO:0005681)
catalytic step 2 spliceosome	BFO:0000051	Prp19 complex (GO:0000974)
catalytic step 2 spliceosome	BFO:0000051	U5 snRNP (GO:0005682)
catalytic step 2 spliceosome	RO:0002215	second spliceosomal transesterification activity (GO:0000386)
catalytic step 2 spliceosome	is_a	catalytic complex (GO:1902494)

Children of catalytic step 2 spliceosome (GO:0071013)

subject	relation	object
U12-type catalytic step 2 spliceosome (GO:0071018)	is_a	catalytic step 2 spliceosome
U2-type catalytic step 2 spliceosome (GO:0071007)	is_a	catalytic step 2 spliceosome

GONUTS Add usage comments for this term on the GONUTS wiki.