Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: Socs16D FBgn0030869

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Description

Suppressor of Cytokine Signaling at 16D

Gene Synonyms

Socs16D

Location

Primary_assembly X: 17,820,764-17,827,564 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 252 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0310310	Socs16D-RB	4906	1021aa	FBpp0301993	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J7H9 F6J7I6 F6J7K0 F6J7K6 F6J7L5 F6J7N5 M9PHY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0074473	Socs16D-RA	4836	1016aa	FBpp0074247	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D9PTS8 F0JAQ1 F6J7H7 F6J7J4 F6J7L3 Q9VX18	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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