Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Psmd1 ENSRNOG00000017730

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Description

proteasome 26S subunit, non-ATPase 1 [Source:RGD Symbol;Acc:621669]

Location

Primary_assembly 9: 86,709,947-86,785,211 forward strand.

mRatBN7.2:CM026982.1

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024306.6	Psmd1-201	3243	953aa	ENSRNOP00000024306.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V8B6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099829.1	Psmd1-203	3571	948aa	ENSRNOP00000086819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6S3	-
ENSRNOT00000089470.2	Psmd1-202	3045	940aa	ENSRNOP00000068871.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTW5	-

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Summary

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