Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sf3b1 ENSRNOG00000013516

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Description

splicing factor 3b, subunit 1 [Source:RGD Symbol;Acc:620148]

Gene Synonyms

Sap155

Location

Primary_assembly 9: 56,492,403-56,532,300 reverse strand.

mRatBN7.2:CM026982.1

About this gene

This gene has 2 transcripts (splice variants), 216 orthologues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019126.6	Sf3b1-201	4954	1304aa	ENSRNOP00000019126.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101949.1	Sf3b1-202	4804	1297aa	ENSRNOP00000095259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AP19	-

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Summary

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