Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: Rfc1 ENSRNOG00000002855

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Description

replication factor C subunit 1 [Source:RGD Symbol;Acc:620619]

Gene Synonyms

Recc1

Location

Primary_assembly 14: 42,966,324-43,041,370 forward strand.

mRatBN7.2:CM026987.1

About this gene

This gene has 2 transcripts (splice variants), 222 orthologues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000003907.8	Rfc1-201	4765	1145aa	ENSRNOP00000003907.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000088674.2	Rfc1-202	3493	1127aa	ENSRNOP00000069524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVK8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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