Chromosome 5: 180,168,088-180,177,674 reverse strand.
Pan_tro_3.0:CM000319.3
This gene has 6 transcripts (splice variants), 66 orthologues and 11 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000079635.1 | - | 2531 | 472aa | ENSPTRP00000093796.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TX17 A0A6D2XBG6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000110580.1 | - | 1499 | 449aa | ENSPTRP00000076107.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8JTN0 A0A6D2WCS2 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000105505.1 | - | 1439 | 429aa | ENSPTRP00000070818.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S1J7 A0A6D2XG40 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000108916.1 | - | 1332 | 443aa | ENSPTRP00000091011.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TP46 | - |
| ENSPTRT00000080845.1 | - | 555 | 184aa | ENSPTRP00000066265.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RNQ0 A0A6D2W669 | - |
| ENSPTRT00000100895.1 | - | 123 | 40aa | ENSPTRP00000093251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8JTP6 A0A6D2YAG9 | - |
