Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMC1A ENSPTRG00000021927

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Description

structural maintenance of chromosomes 1A [Source:VGNC Symbol;Acc:VGNC:11642]

Location

Chromosome X: 53,004,997-53,053,840 reverse strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000040750.5	SMC1A-202	3825	1233aa	ENSPTRP00000037651.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WBQ3 K7CY55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000096572.1	SMC1A-201	9443	54aa	ENSPTRP00000068800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWW0 A0A6D2XAN3	-
ENSPTRT00000096797.1	SMC1A-203	3976	1211aa	ENSPTRP00000079438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQX5 A0A6D2WGG3	-

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Summary

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