Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RAD54B ENSPTRG00000020427

.

Description

RAD54 homolog B [Source:HGNC Symbol;Acc:HGNC:17228]

Location

Chromosome 8: 96,030,594-96,139,528 reverse strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 4 transcripts (splice variants), 201 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000037798.5	RAD54B-201	3078	910aa	ENSPTRP00000034934.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QWF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000093654.1	RAD54B-203	6393	299aa	ENSPTRP00000082522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WWL1 K7DPQ4	-
ENSPTRT00000109448.1	RAD54B-204	5404	117aa	ENSPTRP00000079604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRL7	-
ENSPTRT00000097601.1	RAD54B-202	3095	726aa	ENSPTRP00000069323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX83 A0A6D2WJ27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.