Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNF ENSPTRG00000017965

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Description

tumor necrosis factor [Source:NCBI gene (formerly Entrezgene);Acc:494186]

Gene Synonyms

TNF-a, TNFA, TNLG1F

Location

Chromosome 6: 31,732,442-31,736,366 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 2 transcripts (splice variants), 114 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000102126.1	TNF-202	705	234aa	ENSPTRP00000069905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZ61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000061970.4	TNF-201	2829	233aa	ENSPTRP00000054518.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U5J3S4 A0A663DHG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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