Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: JAG1 ENSPTRG00000013250

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Description

jagged canonical Notch ligand 1 [Source:VGNC Symbol;Acc:VGNC:6177]

Location

Chromosome 20: 10,500,190-10,536,480 reverse strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 3 transcripts (splice variants), 174 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024635.5	JAG1-201	5981	1218aa	ENSPTRP00000022729.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WM77 H2QJZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108499.1	JAG1-202	3609	1202aa	ENSPTRP00000084750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T680	-
ENSPTRT00000103617.1	JAG1-203	3540	1179aa	ENSPTRP00000077058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKP8	-

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Summary

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