Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RTKN ENSPTRG00000012086

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Description

rhotekin [Source:VGNC Symbol;Acc:VGNC:357]

Location

Chromosome 2A: 75,911,316-75,927,885 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000022479.4	RTKN-203	2677	563aa	ENSPTRP00000020742.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VY11 H2QI61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087814.1	RTKN-201	3941	513aa	ENSPTRP00000077087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJ58 A0A6D2XBR0	-
ENSPTRT00000093943.1	RTKN-202	3692	550aa	ENSPTRP00000082022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VZQ5 K7C3X6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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