Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SF3B2 ENSPTRG00000003912

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Description

splicing factor 3b subunit 2 [Source:VGNC Symbol;Acc:VGNC:3052]

Location

Chromosome 11: 66,146,592-66,163,870 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086783.1	SF3B2-202	2697	898aa	ENSPTRP00000069263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000082091.1	SF3B2-201	3603	895aa	ENSPTRP00000089573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKX5 A0A6D2WX50	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000007310.5	SF3B2-203	2676	891aa	ENSPTRP00000006745.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q457	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000102276.1	SF3B2-204	2649	882aa	ENSPTRP00000093688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWY2	-

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Summary

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