Gene: Bhlhe40 ENSMUSG00000030103

Description

basic helix-loop-helix family, member e40 [Source:MGI Symbol;Acc:MGI:1097714]

Gene Synonyms

Bhlhb2, C130042M06Rik, CR8, Clast5, DEC1, Sharp2, Stra13, Stra14, cytokine response gene 8, eip1 (E47 interaction protein 1)

Location

Chromosome 6: 108,637,590-108,643,886 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 4 transcripts (splice variants), 271 orthologues, 11 paralogues and is associated with 46 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032194.11	Bhlhe40-201	3113	411aa	ENSMUSP00000032194.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20400	O35185 Q542A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000163617.2	Bhlhe40-202	476	132aa	ENSMUSP00000132157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9Q2C3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000204550.2	Bhlhe40-204	2620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000166346.2	Bhlhe40-203	368	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Gene: Bhlhe40 ENSMUSG00000030103

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Gene: Bhlhe40 ENSMUSG00000030103

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