Transcript: ENSDART00000043960.8 agfg1a-201

Description

ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]

Gene Synonyms

agfg1, hrb, wu:fb14f05, wu:fi19d11

Location

About this transcript

This transcript has 13 exons, is annotated with 21 domains and features, is associated with 1064 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043960.8	agfg1a-201	2581	556aa	ENSDARP00000043959.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9R7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144944.2	agfg1a-202	785	225aa	ENSDARP00000117201.1	Nonsense mediated decay	F1QPM2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,581 bps, Translation length: 556 residues

Version

ENSDART00000043960.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.