Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ptprr ENSDARG00000105744

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Description

protein tyrosine phosphatase receptor type R [Source:ZFIN;Acc:ZDB-GENE-101029-2]

Location

Chromosome 4: 74,226,447-74,271,898 forward strand.

GRCz11:CM002888.2

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues and 55 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174336.2	ptprr-201	6360	395aa	ENSDARP00000143232.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191455.1	ptprr-204	6360	395aa	ENSDARP00000146621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZV5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180062.1	ptprr-203	6360	395aa	ENSDARP00000155426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZV5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174385.2	ptprr-202	2026	121aa	ENSDARP00000143231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZV1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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