Gene: pdgfrb ENSDARG00000100897

Description

platelet-derived growth factor receptor, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030805-2]

Gene Synonyms

pdgfrb2

Location

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 198 orthologues, 76 paralogues and is associated with 26 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177244.2	pdgfrb-202	7594	1072aa	ENSDARP00000152459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QHE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000167247.2	pdgfrb-201	3195	1064aa	ENSDARP00000138883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2L2B8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary