Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: runx2b ENSDARG00000059233

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Description

RUNX family transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]

Location

Chromosome 20: 43,994,848-44,090,660 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 5 transcripts (splice variants), 78 orthologues, 3 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048978.8	runx2b-201	1707	478aa	ENSDARP00000048977.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000125898.3	runx2b-205	2491	450aa	ENSDARP00000112126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3L8U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082265.6	runx2b-202	1533	450aa	ENSDARP00000076702.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3L8U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082276.5	runx2b-203	1128	328aa	ENSDARP00000076713.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVK7	-
ENSDART00000082283.6	runx2b-204	675	181aa	ENSDARP00000076720.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4VW82	-

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Summary

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