Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cry1a ENSDARG00000045768

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Description

cryptochrome circadian regulator 1a [Source:ZFIN;Acc:ZDB-GENE-010426-2]

Gene Synonyms

cry1a, cry1aa, zcry1a, zgc:153885

Location

Chromosome 4: 12,013,043-12,026,507 forward strand.

GRCz11:CM002888.2

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130692.4	cry1a-202	3301	619aa	ENSDARP00000112452.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000067281.6	cry1a-201	1984	619aa	ENSDARP00000067280.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN37	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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