Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pfkpa ENSDARG00000028000

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Description

phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]

Gene Synonyms

si:ch73-73n3.1

Location

Chromosome 24: 3,963,684-4,004,537 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 5 transcripts (splice variants), 219 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033394.9	pfkpa-201	3646	787aa	ENSDARP00000029635.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000167043.3	pfkpa-203	4228	787aa	ENSDARP00000137388.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITA8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000185926.1	pfkpa-205	4228	787aa	ENSDARP00000147122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RK99	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000182959.1	pfkpa-204	4150	761aa	ENSDARP00000150430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEU0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131753.2	pfkpa-202	981	327aa	ENSDARP00000121464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2A3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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