Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pdha1b ENSDARG00000010555

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Description

pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]

Gene Synonyms

fp73b04, wu:fp73b04, zgc:92705

Location

Chromosome 24: 24,273,371-24,282,427 reverse strand.

GRCz11:CM002908.2

About this gene

This gene has 3 transcripts (splice variants), 223 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018420.8	pdha1b-201	1712	393aa	ENSDARP00000012693.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000123299.4	pdha1b-202	2432	400aa	ENSDARP00000110363.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9W7	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000146482.2	pdha1b-203	543	165aa	ENSDARP00000121414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBJ0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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