Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAB39 ENSBTAG00000040055

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Description

calcium binding protein 39 [Source:VGNC Symbol;Acc:VGNC:26661]

Location

Primary_assembly 2: 118,530,388-118,632,791 forward strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000123360.1	CAB39-204	3900	435aa	ENSBTAP00000098529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000131397.1	CAB39-203	4108	375aa	ENSBTAP00000080080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000053463.3	CAB39-201	3855	341aa	ENSBTAP00000052156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29RI6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000111128.1	CAB39-202	3789	319aa	ENSBTAP00000084846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000080576.2	CAB39-205	3550	368aa	ENSBTAP00000063808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1I0	-

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Summary

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