Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL4A2 ENSBTAG00000025210

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Description

collagen type IV alpha 2 chain [Source:VGNC Symbol;Acc:VGNC:50082]

Location

Primary_assembly 12: 84,995,988-85,154,242 forward strand.

ARS-UCD1.3:CM008179.2

About this gene

This gene has 4 transcripts (splice variants), 162 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005916.6	COL4A2-204	6333	1710aa	ENSBTAP00000005916.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N7Q7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000096792.1	COL4A2-201	1237	82aa	ENSBTAP00000089368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000116908.1	COL4A2-202	716	100aa	ENSBTAP00000092179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000135368.1	COL4A2-203	684	78aa	ENSBTAP00000086756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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