Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNCAIP ENSBTAG00000021971

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Description

synuclein alpha interacting protein [Source:VGNC Symbol;Acc:VGNC:35060]

Location

Primary_assembly 7: 31,380,713-31,541,288 reverse strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 10 transcripts (splice variants) and 194 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000029292.7	SNCAIP-204	3644	1013aa	ENSBTAP00000029292.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BD13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000101503.1	SNCAIP-203	3957	945aa	ENSBTAP00000097068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000083859.2	SNCAIP-207	3876	995aa	ENSBTAP00000071434.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BD13	-
ENSBTAT00000078736.2	SNCAIP-206	3851	969aa	ENSBTAP00000058210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LHI7	-
ENSBTAT00000109906.1	SNCAIP-201	3805	919aa	ENSBTAP00000099684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000114036.1	SNCAIP-202	3704	893aa	ENSBTAP00000087626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000097822.1	SNCAIP-205	3632	961aa	ENSBTAP00000083947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000091742.1	SNCAIP-210	3309	969aa	ENSBTAP00000074678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000118899.1	SNCAIP-208	3233	991aa	ENSBTAP00000100330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000131238.1	SNCAIP-209	2998	990aa	ENSBTAP00000077468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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