Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRKCB ENSBTAG00000020921

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Description

protein kinase C beta [Source:VGNC Symbol;Acc:VGNC:33328]

Location

Primary_assembly 25: 21,505,325-21,880,935 forward strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 4 transcripts (splice variants), 149 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070516.2	PRKCB-202	2954	673aa	ENSBTAP00000070362.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000042942.5	PRKCB-203	2795	620aa	ENSBTAP00000040548.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ88	-
ENSBTAT00000027870.6	PRKCB-204	2787	624aa	ENSBTAP00000027870.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P05126	-
ENSBTAT00000084339.2	PRKCB-201	2697	671aa	ENSBTAP00000065659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P05126	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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