Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NFATC2 ENSBTAG00000018270

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Description

nuclear factor of activated T cells 2 [Source:VGNC Symbol;Acc:VGNC:32031]

Location

Primary_assembly 13: 79,244,982-79,401,870 reverse strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 3 transcripts (splice variants), 271 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082305.2	NFATC2-203	3498	1111aa	ENSBTAP00000061181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMQ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000024318.7	NFATC2-201	3957	918aa	ENSBTAP00000024318.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MGR9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067889.2	NFATC2-202	3897	898aa	ENSBTAP00000065098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N525	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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