Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC5 ENSBTAG00000016254

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Description

histone deacetylase 5 [Source:VGNC Symbol;Acc:VGNC:50612]

Location

Primary_assembly 19: 43,913,857-43,951,107 reverse strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 5 transcripts (splice variants), 194 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000089183.1	HDAC5-201	3584	1165aa	ENSBTAP00000084340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061581.4	HDAC5-204	3808	1104aa	ENSBTAP00000053450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MNA5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000109120.1	HDAC5-202	3523	1031aa	ENSBTAP00000076511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000038317.5	HDAC5-203	2956	788aa	ENSBTAP00000038132.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2T9N9	-
ENSBTAT00000079289.2	HDAC5-205	2235	744aa	ENSBTAP00000068806.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD29	-

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Summary

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