Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDGFA ENSBTAG00000014541

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Description

platelet derived growth factor subunit A [Source:VGNC Symbol;Acc:VGNC:32689]

Location

Primary_assembly 25: 42,011,395-42,030,668 forward strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 6 transcripts (splice variants), 262 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118301.1	PDGFA-204	2536	510aa	ENSBTAP00000076527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000115824.1	PDGFA-202	1873	227aa	ENSBTAP00000097672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000107752.1	PDGFA-201	1814	199aa	ENSBTAP00000080201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000121261.1	PDGFA-203	1580	214aa	ENSBTAP00000090084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073586.2	PDGFA-205	1406	201aa	ENSBTAP00000073627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NM64	-
ENSBTAT00000019323.7	PDGFA-206	1353	202aa	ENSBTAP00000019323.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KJ15	-

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Summary

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