Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LIMS1 ENSBTAG00000010971

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Description

LIM zinc finger domain containing 1 [Source:VGNC Symbol;Acc:VGNC:50211]

Location

Primary_assembly 11: 44,715,276-44,796,595 reverse strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 8 transcripts (splice variants), 253 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014566.6	LIMS1-202	2621	449aa	ENSBTAP00000014566.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QGZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000115732.1	LIMS1-201	2432	386aa	ENSBTAP00000081146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000123740.1	LIMS1-203	2355	345aa	ENSBTAP00000095278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000087084.2	LIMS1-204	2134	337aa	ENSBTAP00000058462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LNQ9 A4FV50	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000124299.1	LIMS1-205	2041	306aa	ENSBTAP00000100900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000084989.2	LIMS1-208	1616	397aa	ENSBTAP00000065598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXS3	-
ENSBTAT00000084407.2	LIMS1-207	1100	307aa	ENSBTAP00000062796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYV8	-
ENSBTAT00000078283.2	LIMS1-206	1089	346aa	ENSBTAP00000065487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXS3	-

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Summary

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