Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRIA1 ENSBTAG00000005800

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Description

glutamate ionotropic receptor AMPA type subunit 1 [Source:VGNC Symbol;Acc:VGNC:29638]

Location

Primary_assembly 7: 64,772,050-65,118,334 forward strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 4 transcripts (splice variants), 323 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000007628.7	GRIA1-201	3288	947aa	ENSBTAP00000007628.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N3G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000082647.2	GRIA1-202	3165	906aa	ENSBTAP00000060290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G0T3G6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000113059.1	GRIA1-203	3165	906aa	ENSBTAP00000092309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000124729.1	GRIA1-204	2925	826aa	ENSBTAP00000099517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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