Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN5 ENSBTAG00000005034

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Description

calpain 5 [Source:VGNC Symbol;Acc:VGNC:26748]

Location

Primary_assembly 15: 56,473,004-56,530,219 forward strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 283 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006638.6	CAPN5-202	4487	640aa	ENSBTAP00000006638.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000131532.1	CAPN5-204	6640	163aa	ENSBTAP00000101046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000105384.1	CAPN5-203	4345	163aa	ENSBTAP00000088913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000114838.1	CAPN5-201	1011	269aa	ENSBTAP00000093472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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