Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CELF1 ENSBTAG00000002520

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Description

CUGBP Elav-like family member 1 [Source:VGNC Symbol;Acc:VGNC:27167]

Location

Primary_assembly 15: 77,288,832-77,368,002 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000077948.2	CELF1-204	2469	550aa	ENSBTAP00000071693.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MB95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000069117.2	CELF1-203	2361	509aa	ENSBTAP00000071348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MNY3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000003274.7	CELF1-205	2288	501aa	ENSBTAP00000003274.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MB95	-
ENSBTAT00000071030.2	CELF1-202	2261	513aa	ENSBTAP00000069764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MB95	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000077828.2	CELF1-201	2100	495aa	ENSBTAP00000065075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MB95	-

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Summary

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