Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPA ENSBTAG00000001933

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Description

protein phosphatase 2 phosphatase activator [Source:VGNC Symbol;Acc:VGNC:33526]

Location

Primary_assembly 11: 99,571,563-99,604,787 forward strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 6 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093041.1	PTPA-201	2648	392aa	ENSBTAP00000082346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000032713.4	PTPA-203	2325	295aa	ENSBTAP00000032642.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KJ44	-
ENSBTAT00000110109.1	PTPA-204	2286	282aa	ENSBTAP00000089101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000088100.1	PTPA-202	2272	316aa	ENSBTAP00000088341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000079342.2	PTPA-206	2242	323aa	ENSBTAP00000057467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LL25	-
ENSBTAT00000116839.1	PTPA-205	1755	105aa	ENSBTAP00000074982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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