Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDC42 ENSBTAG00000001700

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Description

cell division cycle 42 [Source:VGNC Symbol;Acc:VGNC:97251]

Location

Primary_assembly 2: 130,713,019-130,787,969 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 773 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000086570.2	CDC42-206	1176	310aa	ENSBTAP00000066180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000088453.1	CDC42-204	1649	191aa	ENSBTAP00000080424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000072639.2	CDC42-201	1192	249aa	ENSBTAP00000059852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KJ93	-
ENSBTAT00000069072.2	CDC42-202	838	187aa	ENSBTAP00000065017.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KJ93	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000043916.5	CDC42-205	633	186aa	ENSBTAP00000041451.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MND1	-
ENSBTAT00000002228.7	CDC42-203	600	175aa	ENSBTAP00000002228.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KJ93	-

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Summary

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