CHEBI:58069 - CDP(3−)

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ChEBI Name CDP(3−)
ChEBI ID CHEBI:58069
ChEBI ASCII Name CDP(3-)
Definition A nucleoside 5'-diphosphate(3−) arising from deprotonation of the three triphosphate OH groups of cytidine 5'-diphosphate (CDP); major species at pH 7.3.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information ZINC000008215630
Download Molfile XML SDF
Formula C9H12N3O11P2
Net Charge -3
Average Mass 400.15260
Monoisotopic Mass 399.99635
InChI InChI=1S/C9H15N3O11P2/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18)/p-3/t4-,6-,7-,8-/m1/s1
InChIKey ZWIADYZPOWUWEW-XVFCMESISA-K
SMILES Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]2O)c(=O)n1
Metabolite of Species Details
Saccharomyces cerevisiae (NCBI:txid4932) Source: yeast.sf.net See: PubMed
Homo sapiens (NCBI:txid9606) See: DOI
Roles Classification
Biological Role(s): Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing CDP(3−) (CHEBI:58069) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
CDP(3−) (CHEBI:58069) has role human metabolite (CHEBI:77746)
CDP(3−) (CHEBI:58069) is a nucleoside 5'-diphosphate(3−) (CHEBI:57930)
CDP(3−) (CHEBI:58069) is conjugate base of CDP (CHEBI:17239)
Incoming N5-(cytidine 5'-diphosphoramidyl)-L-glutamine(2−) (CHEBI:141583) has functional parent CDP(3−) (CHEBI:58069)
cytidine 3'-phospho-5'-diphosphoramidate(4−) (CHEBI:141584) has functional parent CDP(3−) (CHEBI:58069)
cytidine 5'-diphosphoramidate(2−) (CHEBI:141582) has functional parent CDP(3−) (CHEBI:58069)
CDP (CHEBI:17239) is conjugate acid of CDP(3−) (CHEBI:58069)
IUPAC Name
5'-O-[(phosphonatooxy)phosphinato]cytidine
Synonyms Sources
CDP UniProt
CDP trianion ChEBI
cytidine 5'-diphosphate ChEBI
cytidine 5'-diphosphate(2−) ChEBI
cytidine 5'-pyrophosphate ChEBI
cytidine 5'-pyrophosphate(2−) ChEBI
Registry Number Type Source
4047405 Reaxys Registry Number Reaxys
Citations Types Sources
18433830 PubMed citation Europe PMC
8632770 PubMed citation Europe PMC
Last Modified
13 March 2017