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> Main
CHEBI:58069 - CDP(3−)
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ChEBI Name
CDP(3−)
ChEBI ID
CHEBI:58069
ChEBI ASCII Name
CDP(3-)
Definition
A nucleoside 5'-diphosphate(3−) arising from deprotonation of the three triphosphate OH groups of cytidine 5'-diphosphate (CDP); major species at pH 7.3.
Stars
This entity has been manually annotated by the ChEBI Team.
Supplier Information
ChemicalBook:CB6423883
,
eMolecules:493823
,
ZINC000001532614
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Formula
C9H12N3O11P2
Net Charge
-3
Average Mass
400.15260
Monoisotopic Mass
399.99635
InChI
InChI=1S/C9H15N3O11P2/c10-
5-
1-
2-
12(9(15)
11-
5)
8-
7(14)
6(13)
4(22-
8)
3-
21-
25(19,20)
23-
24(16,17)
18/h1-
2,4,6-
8,13-
14H,3H2,(H,19,20)
(H2,10,11,15)
(H2,16,17,18)
/p-
3/t4-
,6-
,7-
,8-
/m1/s1
InChIKey
ZWIADYZPOWUWEW-XVFCMESISA-K
SMILES
Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]2O)c(=O)n1
Metabolite of Species
Details
Saccharomyces cerevisiae
(NCBI:txid4932)
Source: yeast.sf.net See:
PubMed
Homo sapiens
(NCBI:txid9606)
See:
DOI
Roles Classification
Biological Role
(s):
Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (
Saccharomyces cerevisiae
).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (
Homo sapiens
).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
CDP(3−) (
CHEBI:58069
)
has role
Saccharomyces cerevisiae
metabolite (
CHEBI:75772
)
CDP(3−) (
CHEBI:58069
)
has role
human metabolite (
CHEBI:77746
)
CDP(3−) (
CHEBI:58069
)
is a
nucleoside 5'-diphosphate(3−) (
CHEBI:57930
)
CDP(3−) (
CHEBI:58069
)
is conjugate base of
CDP (
CHEBI:17239
)
Incoming
N
5
-(cytidine 5'-diphosphoramidyl)-
L
-glutamine(2−) (
CHEBI:141583
)
has functional parent
CDP(3−) (
CHEBI:58069
)
cytidine 3'-phospho-5'-diphosphoramidate(4−) (
CHEBI:141584
)
has functional parent
CDP(3−) (
CHEBI:58069
)
cytidine 5'-diphosphoramidate(2−) (
CHEBI:141582
)
has functional parent
CDP(3−) (
CHEBI:58069
)
CDP (
CHEBI:17239
)
is conjugate acid of
CDP(3−) (
CHEBI:58069
)
IUPAC Name
5'-
O
-[(phosphonatooxy)phosphinato]cytidine
Synonyms
Sources
CDP
UniProt
CDP trianion
ChEBI
cytidine 5'-diphosphate
ChEBI
cytidine 5'-diphosphate(2−)
ChEBI
cytidine 5'-pyrophosphate
ChEBI
cytidine 5'-pyrophosphate(2−)
ChEBI
Registry Number
Type
Source
4047405
Reaxys Registry Number
Reaxys
Citations
Types
Sources
18433830
PubMed citation
Europe PMC
8632770
PubMed citation
Europe PMC
Last Modified
13 March 2017