CHEBI:28862 - dGDP

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ChEBI Name dGDP
ChEBI ID CHEBI:28862
Definition A purine 2'-deoxyribonucleoside 5'-diphosphate having guanine as the nucleobase.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:41949, CHEBI:10495, CHEBI:19245
Supplier Information ChemicalBook:CB9666441, ChemicalBook:CB2112323, eMolecules:524832, ZINC000003802189
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Formate (IUPAC name: methanoate) is the conjugate base of formic acid. Formate is an anion (HCO−2) or its derivatives such as ester of formic acid. The salts and esters are generally colorless.
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Formula C10H15N5O10P2
Net Charge 0
Average Mass 427.20132
Monoisotopic Mass 427.02942
InChI InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
InChIKey CIKGWCTVFSRMJU-KVQBGUIXSA-N
SMILES Nc1nc2n(cnc2c(=O)[nH]1)[C@H]1C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O1
Metabolite of Species Details
Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Roles Classification
Biological Role(s): fundamental metabolite
Any metabolite produced by all living cells.
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
(via nucleoside 5'-diphosphate )
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ChEBI Ontology
Outgoing dGDP (CHEBI:28862) has role fundamental metabolite (CHEBI:78675)
dGDP (CHEBI:28862) is a deoxyguanosine phosphate (CHEBI:23625)
dGDP (CHEBI:28862) is a guanyl deoxyribonucleotide (CHEBI:63573)
dGDP (CHEBI:28862) is a purine 2'-deoxyribonucleoside 5'-diphosphate (CHEBI:37036)
dGDP (CHEBI:28862) is conjugate acid of dGDP(3−) (CHEBI:58595)
Incoming dGDP(3−) (CHEBI:58595) is conjugate base of dGDP (CHEBI:28862)
IUPAC Name
2'-deoxyguanosine 5'-(trihydrogen diphosphate)
Synonyms Sources
2'-deoxyguanosine 5'-diphosphate ChEBI
2'-Deoxyguanosine 5'-diphosphate KEGG COMPOUND
deoxyguanosine diphosphate ChEBI
dGDP KEGG COMPOUND
Manual Xrefs Databases
C00019355 KNApSAcK
C00361 KEGG COMPOUND
DB03491 DrugBank
Deoxyguanosine_diphosphate Wikipedia
DGDP MetaCyc
DGI PDBeChem
ECMDB00960 ECMDB
HMDB0000960 HMDB
YMDB00898 YMDB
View more database links
Registry Number Type Source
68703 Reaxys Registry Number Reaxys
Citations
Last Modified
27 January 2016