Locus: AT1G01010
    
Representative Gene Model (?)   
AT1G01010.1
Gene Model Type    protein_coding
Other names:   
ANAC001, NAC DOMAIN CONTAINING PROTEIN 1, NAC001, NTL10
Description (?)   Member of the NAC domain containing family of plant specific transcriptional regulators.
Map Detail Image  

Center on AT1G01010 | Full-screen view

Annotations (?)  
category   relationship type (?)   keyword (?)
GO Biological Process   involved in   regulation of DNA-templated transcription
GO Cellular Component   located in   nucleus
GO Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding
Growth and Developmental Stages   expressed during   flowering stage, petal differentiation and expansion stage, plant embryo globular stage
Plant structure   expressed in   collective leaf structure, flower pedicel, guard cell, plant embryo, root, sepal, stamen, stem
Annotation Detail
Sequence (?)   full length cDNA   full length CDS   full length genomic   protein
RNA Data  
 
One-channel Arrays  
array element
name (?)		 avg. signal
intensity (std. error) 		avg. signal
percentile (std. error)
261585_AT 57.009 (2.210) 35.843 (0.511)
 
Associated Transcripts (?)  
type number associated
EST ( 8 )
cDNA ( 2 )
BAR eFP Browser  
Chromosome   1
Protein Data (?)  
name   length(aa)   molecular weight   isoelectric point   INTERPRO domains
AT1G01010.1    429    49425.5    4.89    NAC-dom:IPR003441
                NAC_dom_sf:IPR036093
Plant Homologs (?)  
treeviewer phylogenes View complete family and tree
Arabidopsis paralogs (?)
AT1G02220(ANAC003) , AT1G02230(ANAC004) ...
Plant orthologs (?)
Eudicotyledons
Brassica napus4
Brassica rapa1
Erythranthe guttata1
Eucalyptus grandis13
Helianthus annuus1
Lactuca sativa1
Spinacia oleracea1
Vitis vinifera5
Monocotyledons
Brachypodium distachyon3
Hordeum vulgare2
Musa acuminata5
Oryza sativa2
Setaria italica2
Sorghum bicolor2
Triticum aestivum6
Zea mays3
Zostera marina1
  
Other plants
Amborella trichopoda3
Nelumbo nucifera1
Physcomitrella patens4
Selaginella moellendorffii1
Search Gene Families   
EnsemblPlants    PhylomeDB
InParanoid Ortholog Groups    Phytozome
PANTHER    PLAZA
PhyloGenes
Map Locations
(?)		  
chrom map map type (?) coordinates orientation attrib
1 AGI nuc_sequence 3631 - 5899 bp forward   details
Map Links (?)   MapViewer     Sequence Viewer     GBrowse     JBrowse
Polymorphism (?)
Showing 15 of 21 entries
(see all)		  
name (?)   type (?)   polymorphism site   gene names   allele type (?)
GABI_414G04   insertion   coding_region   AT1G01010.1   unknown
GK-261C02-014925   insertion   intron   AT1G01010.1   unknown
GK-414G04-026070   insertion   exon   AT1G01010.1   unknown
GK-534H04-020375   insertion   promoter   AT1G01010.1   unknown
GT_5_106245   insertion   coding_region   AT1G01010.1   unknown
MASC05015   substitution   intron   AT1G01010.1   unknown
MASC06498   insertion   intron   AT1G01010.1   unknown
MASC06499   INDEL   intron   AT1G01010.1   unknown
MASC06500   insertion   intron   AT1G01010.1   unknown
PERL0000013   substitution   exon   AT1G01010.1   unknown
PERL0000017   substitution   exon   AT1G01010.1   unknown
RATM11-4514-1_G   insertion   coding_region   AT1G01010.1   unknown
RATM11-4514-1_H   insertion   coding_region   AT1G01010.1   unknown
SAIL_228_B11.v1   insertion   exon   AT1G01010.1   unknown
SAIL_864_B08   insertion   promoter   AT1G01010.1   unknown
Germplasm
(?)
Showing 9 of 9 entries
  
name   polymorphisms   background   stock name
SALK_128569   SALK_128569.34.95.x; SALKseq_128569.1; SALKseq_128569.2     SALK_128569
images
None available  
phenotypes (?)
None available
SALK_128571   SALK_128571.33.50.x; SALKseq_128571.0     SALK_128571
images
None available  
phenotypes (?)
None available
SALK_074723   SALK_074723.37.35.x     SALK_074723
images
None available  
phenotypes (?)
None available
SAIL_228_B11   SAIL_228_B11.v1     CS810563
images
None available  
phenotypes (?)
None available
SAIL_864_B08   SAIL_864_B08     CS877485
images
None available  
phenotypes (?)
None available
SALK_074723C   SALK_074723.37.35.x     SALK_074723C
images
None available  
phenotypes (?)
None available
CS2101416       CS2101416
images
None available  
phenotypes (?)
None available
CS2101417       CS2101417
images
None available  
phenotypes (?)
None available
CS2101418       CS2101418
images
None available  
phenotypes (?)
None available
(European Users)
Clones (?)
(showing 15 of 23 entries)
(see all) 		 
Clone Name Aliases GenBank
Accession		 Vector
Type		 Stock Number
U14978    BT001115
plasmid  U14978
PYAT1G01010    plasmid  PYAT1G01010
CATMA1A00010    plasmid  CD271585
DKLAT1G01010    plasmid  DKLAT1G01010
G14978    plasmid  G14978
CIW00374    plasmid  CIW00374
CSHL_008876  AMR4844-99722815  plasmid  CSHL_008876
PDEST-AD036E11    plasmid  PDEST-AD036E11
PDEST-DB036E11    plasmid  PDEST-DB036E11
HALO_SFI_36-E11    plasmid  HALO_SFI_36-E11
CIW03492    plasmid  CIW03492
CIW06953    plasmid  CIW06953
AT1G01010-PDESTAD-2    plasmid  AT1G01010-PDESTAD-2
TOPO-U04-D01    plasmid  TOPO-U04-D01
DEST-U04-D01    plasmid  DEST-U04-D01
External Link (?)   
Epigenomics
  Danforth Center Small RNA/PARE/Methylation
Expression/Localization
  AraQTL
  ATTED-II
  eFP Browser
  Eukaryotic Promoter Database (EPD)
  The Subcellular Location of Proteins in Arabidopsis Database (SUBA)
  TraVA:Transcription Variation Analysis
Gene Families   Links moved to Gene Families band [show me where]
Genomics
  AceView
  Gramene
  MIPS
  NCBI-Entrez Gene
  Thalemine at BAR
Interactions
  BioGRID
Other
  BAR ePlant
  BAR ePlant Molecule View
Polymorphisms/Alleles/Variants
  Salk SNP Viewer
  T-DNA Express
Proteomics
  AlphaFold Protein Structure Database
  Functional Analysis Tools for Post-Translational Modifications(FAT-PTM)
  Plant Proteome Database
  Plant PTM Viewer
Reagents
  Agrisera (antibody)
  Arabidopsis Biological Resource Center (ABRC) (Seed/DNA)
  PhytoAB (antibody)
  RIKEN BioResource Research Center (Seed/DNA)
Community Comments (?) (shows only the most recent comments by default)
 
     
Publication (?)   
author/title     source     associated loci     date
Castillo, M C, Coego, A, Costa-Broseta, Á, León, J
Nitric oxide responses in Arabidopsis hypocotyls are mediated by diverse phytohormone pathways
     JOURNAL OF EXPERIMENTAL BOTANY     AT1G01010  AT1G09530  AT1G13300  AT1G27730  AT1G44830  AT1G56650  AT1G68190  AT1G71030  AT1G74930  AT1G77200  AT1G77920  AT2G22200  AT2G30250  AT3G18400  AT3G21890  AT3G28910  AT3G46090  AT4G17500  AT4G22680  AT4G38960  more...     2018
Gaudinier A, Rodriguez-Medina J, Zhang L, Olson A, Liseron-Monfils C, Bagman AM, Foret J, Abbitt S, Tang M, Li B, Runcie DE, Kliebenstein DJ, Shen B, Frank MJ, Ware D, Brady SM
Transcriptional regulation of nitrogen-associated metabolism and growth.
     NATURE     AT1G01010  AT1G01060  AT1G01720  AT1G02220  AT1G02340  AT1G03840  AT1G04240  AT1G04880  AT1G05380  AT1G05805  AT1G06070  AT1G07520  AT1G07980  AT1G09540  AT1G10120  AT1G10480  AT1G12260  AT1G12610  AT1G12630  AT1G12860  more...     2018
Liang, M, Li, H, Zhou, F, Li, H, Liu, J, Hao, Y, Wang, Y, Zhao, H, Han, S
Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana
     TRAFFIC     AT1G01010  AT2G27300  AT3G44290  AT4G01550  AT5G04410  AT5G22290      2015
Ding, Y, Liu, N, Virlouvet, L, Riethoven, J J, Fromm, M, Avramova, Z
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana
     BMC PLANT BIOLOGY     AT1G01010  AT1G01030  AT1G01060  AT1G01250  AT1G01520  AT1G02220  AT1G02230  AT1G02340  AT1G02610  AT1G03790  AT1G05710  AT1G06040  AT1G06160  AT1G06180  AT1G06850  AT1G06910  AT1G08810  AT1G10120  AT1G10200  AT1G10585  more...     2013
Hanada, K, Sawada, Y, Kuromori, T, Klausnitzer, R, Saito, K, Toyoda, T, Shinozaki, K, Li, W H, Hirai, M Y
Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana
     MOLECULAR BIOLOGY AND EVOLUTION     AT1G01010  AT1G01030  AT1G01060  AT1G01120  AT1G01190  AT1G01280  AT1G01350  AT1G01390  AT1G01420  AT1G01430  AT1G01480  AT1G01490  AT1G01580  AT1G01590  AT1G01610  AT1G01620  AT1G01660  AT1G01670  AT1G01680  AT1G01700  more...     2010
Ascencio-Ibanez, Jose Trinidad, Sozzani, Rosangela, Lee, Tae-Jin, Chu, Tzu-Ming, Wolfinger, Russell D, Cella, Rino, Hanley-Bowdoin, Linda
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.
     PLANT PHYSIOLOGY     AT1G01010  AT1G01030  AT1G01040  AT1G01060  AT1G01080  AT1G01090  AT1G01120  AT1G01140  AT1G01190  AT1G01290  AT1G01300  AT1G01320  AT1G01340  AT1G01350  AT1G01430  AT1G01470  AT1G01550  AT1G01560  AT1G01620  AT1G01725  more...     2008
Filatov, Victor, Dowdle, John, Smirnoff, Nicholas, Ford-Lloyd, Brian, Newbury, H John, Macnair, Mark R
A quantitative trait loci analysis of Zinc hyperaccumulation in Arabidopsis halleri.
     THE NEW PHYTOLOGIST     AT1G01010  AT1G01210  AT1G09240  AT1G11900  AT1G13220  AT1G23730  AT1G45145  AT1G52790  AT2G03510  AT2G23150  AT2G28950  AT2G30080  AT2G43590  AT3G07950  AT3G13950  AT3G16450  AT3G22240  AT3G22460  AT3G47790  AT4G07950  more...     2007
Rangwala, Sanjida H, Richards, Eric J
Differential Epigenetics Regulation Within an Arabidopsis Retroposon Family.
     GENETICS     AT1G01010  AT1G69770  AT2G10410  AT4G04040  AT4G38740  AT5G49160  AT5G63110      2007
Grafi, Gideon, Ben-Meir, Hagit, Avivi, Yigal, Moshe, Maya, Dahan, Yardena, Zemach, Assaf
Histone methylation controls telomerase-independent telomere lengthening in cells undergoing dedifferentiation.
     DEVELOPMENTAL BIOLOGY     AT1G01010  AT1G17280  AT5G13960  AT5G16850  AT5G37230  AT5G37270      2007
Palaniswamy, Saranyan K, James, Stephen, Sun, Hao, Lamb, Rebecca S, Davuluri, Ramana V, Grotewold, Erich
AGRIS and AtRegNet. A Platform to Link cis-Regulatory Elements and Transcription Factors into Regulatory Networks.
     PLANT PHYSIOLOGY     AT1G01010      2006
Becerra, Cristian, Puigdomenech, Pere, Vicient, Carlos
Computational and experimental analysis identifies Arabidopsis genes specifically expressed during early seed development.
     BMC GENOMICS     AT1G01010  AT1G03790  AT1G03890  AT1G14950  AT1G18340  AT1G48130  AT1G48660  AT1G60987  AT1G62060  AT1G65090  AT1G67100  AT1G68380  AT1G71691  AT1G73190  AT1G80090  AT2G02490  AT2G28420  AT2G33520  AT2G34700  AT2G43260  more...     2006
Knowles, David G, McLysaght, Aoife
High Rate of Recent Intron Gain and Loss in Simultaneously Duplicated Arabidopsis genes.
     MOLECULAR BIOLOGY AND EVOLUTION     AT1G01010  AT1G02980  AT1G05900  AT1G09080  AT1G11950  AT1G15080  AT1G18410  AT1G18870  AT1G19180  AT1G20650  AT1G23210  AT1G30810  AT1G30820  AT1G52000  AT1G55970  AT1G62310  AT1G70710  AT1G73860  AT1G74950  AT1G76360  more...     2006
Rangwala SH, Elumalai R, Vanier C, Ozkan H, Galbraith DW, Richards EJ
Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon.
     PLOS GENET     AT1G01010  AT1G03420  AT1G30835  AT1G35112  AT1G44935  AT1G50735  AT2G01410  AT2G10410  AT3G02515  AT3G13438  AT3G31442  AT3G42658  AT3G44042  AT3G58865  AT4G01525  AT4G38740  AT5G27927  AT5G28626  AT5G28913      2006
Kuo, Hui-Fen, Olsen, Kenneth M, Richards, Eric J
Natural variation in a subtelomeric region of Arabidopsis: implications for the genomic dynamics of a chromosome end.
     GENETICS     AT1G01010      2006
View Complete List   (15 of 20 displayed)
Date last modified    2023-10-04
TAIR Accession    Locus:2200935