Representative Gene
Model
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Gene Model Type |
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protein_coding |
Other names: |
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ANAC001, NAC DOMAIN CONTAINING PROTEIN 1, NAC001, NTL10 |
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Description |
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Member of the NAC domain containing family of plant specific transcriptional regulators. |
Map Detail Image |
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Center on AT1G01010
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Full-screen view
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Annotations |
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category |
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relationship
type |
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keyword |
GO Biological Process
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involved in
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regulation of DNA-templated transcription
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GO Cellular Component
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located in
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nucleus
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GO Molecular Function
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enables
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DNA-binding transcription factor activity, transcription cis-regulatory region binding
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Growth and Developmental Stages
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expressed during
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flowering stage, petal differentiation and expansion stage, plant embryo globular stage
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Plant structure
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expressed in
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collective leaf structure, flower pedicel, guard cell, plant embryo, root, sepal, stamen, stem
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Annotation Detail |
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Sequence |
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full length cDNA
full length CDS
full length genomic
protein
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RNA Data |
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One-channel Arrays |
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array element name |
avg. signal intensity
(std. error)
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avg. signal percentile
(std. error)
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261585_AT |
57.009
(2.210) |
35.843
(0.511) |
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Associated Transcripts |
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type |
number associated |
EST |
( 8 )
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cDNA |
( 2 )
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BAR eFP Browser |
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Chromosome |
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1 |
Protein Data |
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Plant Homologs |
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View complete family and tree
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Eudicotyledons |
Brassica napus | 4 |
Brassica rapa | 1 |
Erythranthe guttata | 1 |
Eucalyptus grandis | 13 |
Helianthus annuus | 1 |
Lactuca sativa | 1 |
Spinacia oleracea | 1 |
Vitis vinifera | 5 |
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Monocotyledons |
Brachypodium distachyon | 3 |
Hordeum vulgare | 2 |
Musa acuminata | 5 |
Oryza sativa | 2 |
Setaria italica | 2 |
Sorghum bicolor | 2 |
Triticum aestivum | 6 |
Zea mays | 3 |
Zostera marina | 1 |
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Other plants |
Amborella trichopoda | 3 |
Nelumbo nucifera | 1 |
Physcomitrella patens | 4 |
Selaginella moellendorffii | 1 |
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Search Gene Families |
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Map Locations |
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chrom |
map |
map type |
coordinates |
orientation |
attrib |
1 |
AGI |
nuc_sequence |
3631
- 5899
bp |
forward |
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details
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Map Links |
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MapViewer Sequence Viewer GBrowse
JBrowse
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Polymorphism
Showing 15
of 21 entries (see all) |
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Germplasm
Showing 9
of 9 entries
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Clones (showing 15 of 23 entries)
(see all)
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External Link |
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Publication |
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author/title |
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source |
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associated loci |
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date |
Castillo, M C, Coego, A, Costa-Broseta, Á, León, J
Nitric oxide responses in Arabidopsis hypocotyls are mediated by diverse phytohormone pathways
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JOURNAL OF EXPERIMENTAL BOTANY |
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AT1G01010
AT1G09530
AT1G13300
AT1G27730
AT1G44830
AT1G56650
AT1G68190
AT1G71030
AT1G74930
AT1G77200
AT1G77920
AT2G22200
AT2G30250
AT3G18400
AT3G21890
AT3G28910
AT3G46090
AT4G17500
AT4G22680
AT4G38960
more...
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2018 |
Gaudinier A, Rodriguez-Medina J, Zhang L, Olson A, Liseron-Monfils C, Bagman AM, Foret J, Abbitt S, Tang M, Li B, Runcie DE, Kliebenstein DJ, Shen B, Frank MJ, Ware D, Brady SM
Transcriptional regulation of nitrogen-associated metabolism and growth.
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NATURE |
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AT1G01010
AT1G01060
AT1G01720
AT1G02220
AT1G02340
AT1G03840
AT1G04240
AT1G04880
AT1G05380
AT1G05805
AT1G06070
AT1G07520
AT1G07980
AT1G09540
AT1G10120
AT1G10480
AT1G12260
AT1G12610
AT1G12630
AT1G12860
more...
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2018 |
Liang, M, Li, H, Zhou, F, Li, H, Liu, J, Hao, Y, Wang, Y, Zhao, H, Han, S
Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana
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TRAFFIC |
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AT1G01010
AT2G27300
AT3G44290
AT4G01550
AT5G04410
AT5G22290
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2015 |
Ding, Y, Liu, N, Virlouvet, L, Riethoven, J J, Fromm, M, Avramova, Z
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana
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BMC PLANT BIOLOGY |
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AT1G01010
AT1G01030
AT1G01060
AT1G01250
AT1G01520
AT1G02220
AT1G02230
AT1G02340
AT1G02610
AT1G03790
AT1G05710
AT1G06040
AT1G06160
AT1G06180
AT1G06850
AT1G06910
AT1G08810
AT1G10120
AT1G10200
AT1G10585
more...
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2013 |
Hanada, K, Sawada, Y, Kuromori, T, Klausnitzer, R, Saito, K, Toyoda, T, Shinozaki, K, Li, W H, Hirai, M Y
Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana
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MOLECULAR BIOLOGY AND EVOLUTION |
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AT1G01010
AT1G01030
AT1G01060
AT1G01120
AT1G01190
AT1G01280
AT1G01350
AT1G01390
AT1G01420
AT1G01430
AT1G01480
AT1G01490
AT1G01580
AT1G01590
AT1G01610
AT1G01620
AT1G01660
AT1G01670
AT1G01680
AT1G01700
more...
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2010 |
Ascencio-Ibanez, Jose Trinidad, Sozzani, Rosangela, Lee, Tae-Jin, Chu, Tzu-Ming, Wolfinger, Russell D, Cella, Rino, Hanley-Bowdoin, Linda
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.
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PLANT PHYSIOLOGY |
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AT1G01010
AT1G01030
AT1G01040
AT1G01060
AT1G01080
AT1G01090
AT1G01120
AT1G01140
AT1G01190
AT1G01290
AT1G01300
AT1G01320
AT1G01340
AT1G01350
AT1G01430
AT1G01470
AT1G01550
AT1G01560
AT1G01620
AT1G01725
more...
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2008 |
Filatov, Victor, Dowdle, John, Smirnoff, Nicholas, Ford-Lloyd, Brian, Newbury, H John, Macnair, Mark R
A quantitative trait loci analysis of Zinc hyperaccumulation in Arabidopsis halleri.
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THE NEW PHYTOLOGIST |
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AT1G01010
AT1G01210
AT1G09240
AT1G11900
AT1G13220
AT1G23730
AT1G45145
AT1G52790
AT2G03510
AT2G23150
AT2G28950
AT2G30080
AT2G43590
AT3G07950
AT3G13950
AT3G16450
AT3G22240
AT3G22460
AT3G47790
AT4G07950
more...
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2007 |
Rangwala, Sanjida H, Richards, Eric J
Differential Epigenetics Regulation Within an Arabidopsis Retroposon Family.
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GENETICS |
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AT1G01010
AT1G69770
AT2G10410
AT4G04040
AT4G38740
AT5G49160
AT5G63110
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2007 |
Grafi, Gideon, Ben-Meir, Hagit, Avivi, Yigal, Moshe, Maya, Dahan, Yardena, Zemach, Assaf
Histone methylation controls telomerase-independent telomere lengthening in cells undergoing dedifferentiation.
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DEVELOPMENTAL BIOLOGY |
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AT1G01010
AT1G17280
AT5G13960
AT5G16850
AT5G37230
AT5G37270
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2007 |
Palaniswamy, Saranyan K, James, Stephen, Sun, Hao, Lamb, Rebecca S, Davuluri, Ramana V, Grotewold, Erich
AGRIS and AtRegNet. A Platform to Link cis-Regulatory Elements and Transcription Factors into Regulatory Networks.
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PLANT PHYSIOLOGY |
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AT1G01010
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2006 |
Becerra, Cristian, Puigdomenech, Pere, Vicient, Carlos
Computational and experimental analysis identifies Arabidopsis genes specifically expressed during early seed development.
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BMC GENOMICS |
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AT1G01010
AT1G03790
AT1G03890
AT1G14950
AT1G18340
AT1G48130
AT1G48660
AT1G60987
AT1G62060
AT1G65090
AT1G67100
AT1G68380
AT1G71691
AT1G73190
AT1G80090
AT2G02490
AT2G28420
AT2G33520
AT2G34700
AT2G43260
more...
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2006 |
Knowles, David G, McLysaght, Aoife
High Rate of Recent Intron Gain and Loss in Simultaneously Duplicated Arabidopsis genes.
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MOLECULAR BIOLOGY AND EVOLUTION |
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AT1G01010
AT1G02980
AT1G05900
AT1G09080
AT1G11950
AT1G15080
AT1G18410
AT1G18870
AT1G19180
AT1G20650
AT1G23210
AT1G30810
AT1G30820
AT1G52000
AT1G55970
AT1G62310
AT1G70710
AT1G73860
AT1G74950
AT1G76360
more...
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2006 |
Rangwala SH, Elumalai R, Vanier C, Ozkan H, Galbraith DW, Richards EJ
Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon.
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PLOS GENET |
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AT1G01010
AT1G03420
AT1G30835
AT1G35112
AT1G44935
AT1G50735
AT2G01410
AT2G10410
AT3G02515
AT3G13438
AT3G31442
AT3G42658
AT3G44042
AT3G58865
AT4G01525
AT4G38740
AT5G27927
AT5G28626
AT5G28913
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2006 |
Kuo, Hui-Fen, Olsen, Kenneth M, Richards, Eric J
Natural variation in a subtelomeric region of Arabidopsis: implications for the genomic dynamics of a chromosome end.
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GENETICS |
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AT1G01010
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2006 |
View Complete List
(15 of 20 displayed)
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Date last modified |
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2023-10-04 |
TAIR Accession |
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Locus:2200935 |