appears_in: []
depends_on: []
deprecated: false
description: The UniProt Knowledgebase (UniProtKB) is a comprehensive resource for
  protein sequence and functional information with extensive cross-references to more
  than 120 external databases. Besides amino acid sequence and a description, it also
  provides taxonomic data and citation information.
example: P0DP23
homepage: http://www.uniprot.org
keywords:
- biology
- protein
- taxonomic classification
mappings:
  aberowl: UP
  biocontext: UniProtKB
  biolink: UniProtKB
  cellosaurus: UniProtKB
  edam: '3021'
  fairsharing: FAIRsharing.wf28wm
  go: UniProtKB
  integbio: nbdc00221
  miriam: uniprot
  n2t: uniprot
  ncbi: UniProt
  prefixcommons: uniprot
  re3data: r3d100011521
  togoid: Uniprot
  wikidata: P352
name: UniProt Protein
namespace_in_lui: false
pattern: ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z,
  0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
preferred_prefix: uniprot
prefix: uniprot
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/uniprot:$1
- code: drugbank
  description: DrugBank PolyPeptide.
  homepage: https://go.drugbank.com
  name: DrugBank Polypeptide
  uri_format: https://go.drugbank.com/polypeptides/$1
- code: indra
  description: A large scale database of biomedical statements.
  homepage: https://db.indra.bio
  name: INDRA Database
  uri_format: https://db.indra.bio/statements/from_agents?&format=html&agent0=$1@UP
- code: iptmnet
  description: Protein post translational modification information
  homepage: https://research.bioinformatics.udel.edu/iptmnet
  name: iPTMnet
  uri_format: https://research.bioinformatics.udel.edu/iptmnet/entry/$1
- code: ncbi
  description: UniProt through NCBI
  homepage: https://www.ncbi.nlm.nih.gov/protein/
  name: UniProt through NCBI
  uri_format: https://www.ncbi.nlm.nih.gov/protein/$1
- code: oma
  description: The OMA project is a method and database for the inference of orthologs
    among complete genomes.
  homepage: https://omabrowser.org/oma/home/
  name: Orthologous Matrix Browser
  uri_format: http://omabrowser.org/cgi-bin/gateway.pl?f=DisplayEntry&p2=orthologs&p1=$1
- code: omnipath
  description: Molecular interations endpoint from OmniPathDB
  homepage: https://omnipathdb.org/
  name: OmniPathDB
  uri_format: https://omnipathdb.org/interactions/?fields=sources,references&partners=$1
- code: scholia
  description: Scholia is a service that creates visual scholarly profiles for topic,
    people, organizations, species, chemicals, etc using bibliographic and other information
    in Wikidata.
  homepage: https://scholia.toolforge.org/
  name: Scholia
  uri_format: https://scholia.toolforge.org/uniprot/$1
publications:
- doi: 10.1093/nar/gkj161
  pmc: PMC1347523
  pubmed: '16381842'
  title: 'The Universal Protein Resource (UniProt): an expanding universe of protein
    information'
  year: 2006
rdf_uri_format: http://purl.uniprot.org/uniprot/$1
synonyms:
- SwissProt
- UP
- UniProt
- UniProtKB
- Uniprot ID
- uniprot/swiss-prot
uri_format: https://purl.uniprot.org/uniprot/$1
