appears_in: []
contact:
  email: adrien.coulet@loria.fr
  name: Adrien Coulet
  orcid: 0000-0002-1466-062X
depends_on: []
deprecated: true
description: SO-Pharm (Suggested Ontology for Pharmacogenomics) is a domain ontology
  implemented in OWL-DL, which proposes a formal description of pharmacogenomic knowledge.
  SO-Pharm articulates different ontologies that represent complementary sub-domains
  of pharmacogenomics, i.e. related to genotype, phenotype, drugs, and clinical trials.
  SO-Pharm enables to represent pharmacogenomic relationships between a drug, a genomic
  variation and a phenotype trait. In addition, it enables to represent patient and
  more largely panel included in trials, and populations. SO-Pharm enables the representation
  of measured items on this patients such as results from the observation of a phenotype
  trait or of genomic variations. SO-Pharm supports knowledge about pharmacogenomic
  hypothesis, case study, and investigations in pharmacogenomics. SO-Pharm is designed
  to facilitate data integration and knowledge discovery in pharmacogenomics. In addition
  it provides a consistent articulation of ontologies of pharmacogenomic sub-domains.
download_owl: http://aber-owl.net/media/ontologies/SOPHARM/18/sopharm.owl
example_extras: []
homepage: http://www.loria.fr/~coulet/sopharm2.0_description.php
keywords:
- obo
- ontology
mappings:
  aberowl: SOPHARM
  biocontext: SOPHARM
  bioportal: SOPHARM
  obofoundry: sopharm
name: Suggested Ontology for Pharmacogenomics
preferred_prefix: SOPHARM
prefix: sopharm
providers: []
publications: []
rdf_uri_format: http://purl.obolibrary.org/obo/SOPHARM_$1
synonyms: []
uri_format: http://purl.obolibrary.org/obo/SOPHARM_$1
