appears_in:
- chiro
- cl
- pcl
- scdo
- uberon
banana: PR
contact:
  email: dan5@georgetown.edu
  github: nataled
  name: Darren Natale
  orcid: 0000-0001-5809-9523
contributor_extras:
- email: dan5@georgetown.edu
  github: nataled
  name: Darren Natale
  orcid: 0000-0001-5809-9523
depends_on: []
deprecated: false
description: The PRotein Ontology (PRO) has been designed to describe the relationships
  of proteins and protein evolutionary classes, to delineate the multiple protein
  forms of a gene locus (ontology for protein forms), and to interconnect existing
  ontologies.
download_obo: http://purl.obolibrary.org/obo/pr.obo
download_owl: http://purl.obolibrary.org/obo/pr.owl
example: '000000024'
example_extras:
- A0A0G2QC33
- A0A0G2QC33-2
- P0DP23
- Q15796
- Q15796-1
homepage: http://proconsortium.org
keywords:
- annotation
- biocuration
- biology
- data model
- glycosylation
- methylation
- obo
- ontology
- phosphorylation
- protein
- protein acetylation
- protein-containing complex
- ptm site prediction
license: CC-BY-4.0
logo: https://raw.githubusercontent.com/PROconsortium/logo/master/PROlogo_small.png
mappings:
  aberowl: PR
  agroportal: PR
  biocontext: PR
  bioportal: PR
  fairsharing: FAIRsharing.4ndncv
  go: PR
  integbio: nbdc01630
  miriam: pr
  n2t: pr
  obofoundry: pr
  ols: pr
  ontobee: PR
  prefixcommons: pr
  uniprot: DB-0181
  wikidata: P4926
name: Protein Ontology
namespace_in_lui: true
pattern: ^(?:\d{9}|[OPQ][0-9][A-Z0-9]{3}[0-9](?:-\d+)?|[A-NR-Z][0-9](?:[A-Z][A-Z0-9]{2}[0-9]){1,2}(?:-\d+)?)$
preferred_prefix: PR
prefix: pr
providers:
- code: CURATOR_REVIEW
  description: Protein Ontology at Georgetown
  homepage: https://proconsortium.org/
  name: Protein Ontology at Georgetown
  uri_format: https://proconsortium.org/app/entry/PR:$1
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/pr:$1
- code: ontorat
  description: Misguided re-labeling of IRIs from ontorat tool
  homepage: http://purl.obolibrary.org/obo/vo/ontorat
  name: OntoRat
  uri_format: http://purl.obolibrary.org/obo/vo/ontorat/PR_$1
publications:
- doi: 10.1093/nar/gkw1075
  pmc: PMC5210558
  pubmed: '27899649'
  title: 'Protein Ontology (PRO): enhancing and scaling up the representation of protein
    entities'
  year: 2016
- doi: 10.1093/nar/gkt1173
  pmc: PMC3964965
  pubmed: '24270789'
  title: 'Protein Ontology: a controlled structured network of protein entities'
  year: 2013
- doi: 10.1186/1471-2105-12-371
  pmc: PMC3189193
  pubmed: '21929785'
  title: The representation of protein complexes in the Protein Ontology (PRO)
  year: 2011
- doi: 10.1093/nar/gkq907
  pmc: PMC3013777
  pubmed: '20935045'
  title: 'The Protein Ontology: a structured representation of protein forms and complexes'
  year: 2010
- doi: 10.1186/1471-2105-8-s9-s1
  pmc: PMC2217659
  pubmed: '18047702'
  title: Framework for a protein ontology
  year: 2007
rdf_uri_format: http://purl.obolibrary.org/obo/PR_$1
references:
- https://github.com/biopragmatics/bioregistry/issues/959
repository: https://github.com/PROconsortium/PRoteinOntology
synonyms:
- PR
- PRO
uri_format: http://purl.obolibrary.org/obo/PR_$1
version: '70.0'
