appears_in: []
banana: OPB
banana_peel: _
contact:
  email: maxneal@gmail.com
  name: Maxwell L. Neal
  orcid: 0000-0002-2390-6572
contributor_extras:
- email: benjamin_gyori@hms.harvard.edu
  github: bgyori
  name: Benjamin M. Gyori
  orcid: 0000-0001-9439-5346
depends_on: []
deprecated: false
description: The OPB is a reference ontology of classical physics as applied to the
  dynamics of biological systems. It is designed to encompass the multiple structural
  scales (multiscale atoms to organisms) and multiple physical domains (multidomain
  fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered
  in the study and analysis of biological organisms.
download_owl: http://aber-owl.net/media/ontologies/OPB/13/opb.owl
example: '00573'
homepage: http://bioportal.bioontology.org/ontologies/OPB
keywords:
- concentration
- kinetic model
- life science
- mathematical model
- ontology
- physics
- structure
mappings:
  aberowl: OPB
  biocontext: OPB
  bioportal: OPB
  fairsharing: FAIRsharing.qcceez
  miriam: opb
  n2t: opb
  prefixcommons: opb
name: Ontology of Physics for Biology
namespace_in_lui: false
pattern: ^\d+$
preferred_prefix: opb
prefix: opb
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/opb:$1
publications:
- doi: 10.1186/2041-1480-4-41
  pmc: PMC3904761
  pubmed: '24295137'
  title: 'Ontology of physics for biology: representing physical dependencies as a
    basis for biological processes'
  year: 2013
- doi: 10.1371/journal.pone.0028708
  pmc: PMC3246444
  pubmed: '22216106'
  title: 'Physical properties of biological entities: an introduction to the ontology
    of physics for biology'
  year: 2011
synonyms: []
uri_format: https://bioportal.bioontology.org/ontologies/OPB/?p=classes&conceptid=http%3A%2F%2Fbhi.washington.edu%2FOPB%23OPB_$1
