appears_in: [] contact: email: daniel.gautheret@u-psud.fr name: Daniel Gautheret orcid: 0000-0002-1508-8469 depends_on: [] deprecated: false description: NAPP (Nucleic Acids Phylogenetic Profiling is a clustering method based on conserved noncoding RNA (ncRNA) elements in a bacterial genomes. Short intergenic regions from a reference genome are compared with other genomes to identify RNA rich clusters. example: '351' homepage: http://napp.u-psud.fr/ keywords: - clustering - genomics - nucleotide mappings: biocontext: NAPP fairsharing: FAIRsharing.vr52p3 miriam: napp n2t: napp prefixcommons: napp name: Nucleic Acids Phylogenetic Profiling namespace_in_lui: false pattern: ^\d+$ preferred_prefix: napp prefix: napp providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/napp:$1 publications: - doi: 10.1093/nar/gkr807 pmc: PMC3245103 pubmed: '21984475' title: 'NAPP: the Nucleic Acid Phylogenetic Profile Database' year: 2011 - doi: 10.1101/gr.089714.108 pmc: PMC2694484 pubmed: '19237465' title: Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles year: 2009 synonyms: [] uri_format: http://rna.igmors.u-psud.fr/NAPP/Niveau2.php?specie=$1