biocontext:
  is_identifiers: true
  is_obo: false
  prefix: MMDB
  uri_format: http://identifiers.org/mmdb/$1
edam:
  description: An identifier of an entry from the MMDB database.
  name: MMDB
  obsolete: false
  prefix: '2667'
mappings:
  biocontext: MMDB
  edam: '2667'
  miriam: mmdb
  n2t: mmdb
  prefixcommons: mmdb
miriam:
  deprecated: false
  description: The Molecular Modeling Database (MMDB) is a database of experimentally
    determined structures obtained from the Protein Data Bank (PDB). Since structures
    are known for a large fraction of all protein families, structure homologs may
    facilitate inference of biological function, or the identification of binding
    or catalytic sites.
  homepage: http://www.ncbi.nlm.nih.gov/sites/entrez?db=structure
  id: '00000121'
  name: Molecular Modeling Database
  namespaceEmbeddedInLui: false
  pattern: ^\d{1,5}$
  prefix: mmdb
  sampleId: '50885'
  uri_format: http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?uid=$1
n2t:
  description: The Molecular Modeling Database (MMDB) is a database of experimentally
    determined structures obtained from the Protein Data Bank (PDB). Since structures
    are known for a large fraction of all protein families, structure homologs may
    facilitate inference of biological function, or the identification of binding
    or catalytic sites.
  example: '50885'
  homepage: http://www.ncbi.nlm.nih.gov/sites/entrez?db=structure
  name: MMDB at NCBI
  namespaceEmbeddedInLui: false
  pattern: ^\d{1,5}$
  prefix: mmdb
  uri_format: http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?uid=$1
prefixcommons:
  description: The Molecular Modeling Database (MMDB), as part of the Entrez system,
    facilitates access to structure data by connecting them with associated literature,
    protein and nucleic acid sequences, chemicals, biomolecular interactions, and
    more.
  example: '50885'
  homepage: http://www.ncbi.nlm.nih.gov/Structure/
  keywords:
  - structure
  - protein
  - DNA
  - small molecule
  - interaction
  name: Molecular Modeling Database
  pattern: ^\d{1,5}$
  prefix: mmdb
  pubmed_ids:
  - '17135201'
  uri_format: http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?uid=$1
publications:
- doi: 10.1093/nar/gkl952
  pmc: PMC1751549
  pubmed: '17135201'
  title: 'MMDB: annotating protein sequences with Entrez''s 3D-structure database.'
  year: 2006