appears_in: []
contact:
  email: BastianFromm@gmail.com
  name: Bastian Fromm
  orcid: 0000-0003-0352-3037
contributor:
  email: palayoor.n@northeastern.edu
  github: nalikapalayoor
  name: Nalika Palayoor
  orcid: 0009-0008-8406-631X
depends_on: []
deprecated: false
description: mircoRNA Gene Database is a collection of animal microRNA genes. This
  database allows researchers to analyze mircoRNA properties like secondary structure
  and features in a phylogenetic context.
example: Hsa-Let-7-P2a3
example_extras: []
github_request_issue: 1393
homepage: https://mirgenedb.org/
keywords: []
mappings: {}
name: microRNA Gene Database
namespace_in_lui: false
pattern: ^[a-zA-Z0-9]+(-[a-zA-Z0-9]+)+$
preferred_prefix: mirgenedb
prefix: mirgenedb
providers: []
publications:
- doi: 10.1093/nar/gkae1094
  pmc: PMC11701709
  pubmed: '39673268'
  title: 'MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel
    conserved microRNA families and updated covariance models'
  year: 2025
- doi: 10.1093/nar/gkab1101
  pmc: PMC8728216
  pubmed: '34850127'
  title: 'MirGeneDB 2.1: toward a complete sampling of all major animal phyla'
  year: 2022
- doi: 10.1093/nar/gkz885
  pmc: PMC6943042
  pubmed: '31598695'
  title: 'MirGeneDB 2.0: the metazoan microRNA complement'
  year: 2020
- doi: 10.1146/annurev-genet-120213-092023
  pmc: PMC4743252
  pubmed: '26473382'
  title: A Uniform System for the Annotation of Vertebrate microRNA Genes and the
    Evolution of the Human microRNAome
  year: 2015
reviewer:
  email: b.gyori@northeastern.edu
  github: bgyori
  name: Benjamin M. Gyori
  orcid: 0000-0001-9439-5346
synonyms: []
uri_format: https://mirgenedb.org/browse?qtype=mgid&org=ALL&query=$1
