biocontext:
  is_identifiers: true
  is_obo: false
  prefix: ENSEMBL.BACTERIA
  uri_format: http://identifiers.org/ensembl.bacteria/$1
fairsharing:
  abbreviation: Ensembl Bacteria
  description: Ensembl Bacteria is a browser for bacterial and archaeal genomes. These
    are taken from the databases of the International Nucleotide Sequence Database
    Collaboration (the European Nucleotide Archive at the EBI, GenBank at the NCBI,
    and the DNA Database of Japan).
  homepage: https://bacteria.ensembl.org/index.html
  license: Apache 2.0 License
  name: Ensembl Bacteria
  prefix: FAIRsharing.zsgmvd
  publications:
  - doi: 10.1093/nar/gkz890
    pubmed_id: 31598706
    title: Ensembl Genomes 2020-enabling non-vertebrate genomic research.
  - doi: 10.1093/nar/gkv1209
    pubmed_id: 26578574
    title: 'Ensembl Genomes 2016: more genomes, more complexity.'
  subjects:
  - Genomics
  - Comparative Genomics
  twitter: ensemblgenomes
mappings:
  biocontext: ENSEMBL.BACTERIA
  fairsharing: FAIRsharing.zsgmvd
  miriam: ensembl.bacteria
  n2t: ensembl.bacteria
  prefixcommons: ensembl.bacteria
  re3data: r3d100011195
  uniprot: DB-0147
miriam:
  deprecated: false
  description: Ensembl Genomes consists of five sub-portals (for bacteria, protists,
    fungi, plants and invertebrate metazoa) designed to complement the availability
    of vertebrate genomes in Ensembl. This collection is concerned with bacterial
    genomes.
  homepage: https://bacteria.ensembl.org/
  id: '00000202'
  name: Ensembl Bacteria
  namespaceEmbeddedInLui: false
  pattern: ^((EB\w+)|([A-Z0-9]+\_[A-Z0-9]+))$
  prefix: ensembl.bacteria
  sampleId: MU9_3181
  uri_format: https://bacteria.ensembl.org/id/$1
n2t:
  description: Ensembl Genomes consists of five sub-portals (for bacteria, protists,
    fungi, plants and invertebrate metazoa) designed to complement the availability
    of vertebrate genomes in Ensembl. This collection is concerned with bacterial
    genomes.
  example: MU9_3181
  homepage: https://bacteria.ensembl.org/
  name: Ensembl Bacteria at EBI
  namespaceEmbeddedInLui: false
  pattern: ^((EB\w+)|([A-Z0-9]+\_[A-Z0-9]+))$
  prefix: ensembl.bacteria
  uri_format: https://bacteria.ensembl.org/id/$1
part_of: ensembl
prefixcommons:
  description: Ensembl Genomes consists of five sub-portals (for bacteria, protists,
    fungi, plants and invertebrate metazoa) designed to complement the availability
    of vertebrate genomes in Ensembl. This collection is concerned with bacterial
    genomes.
  example: EBESCT00000015660
  homepage: http://bacteria.ensembl.org/
  keywords:
  - genome
  name: Ensembl Bacteria
  pattern: ^EB\w+$
  prefix: ensembl.bacteria
  pubmed_ids:
  - '19884133'
  uri_format: http://bacteria.ensembl.org/[?species_name]/Gene/Summary?g=$1
publications:
- doi: 10.1093/nar/gkz890
  pmc: PMC6943047
  pubmed: '31598706'
  title: Ensembl Genomes 2020-enabling non-vertebrate genomic research.
  year: 2020
- doi: 10.1093/nar/gkv1209
  pmc: PMC4702859
  pubmed: '26578574'
  title: 'Ensembl Genomes 2016: more genomes, more complexity.'
  year: 2015
- doi: 10.1093/nar/gkp871
  pmc: PMC2808935
  pubmed: '19884133'
  title: 'Ensembl Genomes: extending Ensembl across the taxonomic space.'
  year: 2009
- doi: 10.1093/nar/gkz890
  pubmed: '31598706'
  title: Ensembl Genomes 2020-enabling non-vertebrate genomic research.
- doi: 10.1093/nar/gkv1209
  pubmed: '26578574'
  title: 'Ensembl Genomes 2016: more genomes, more complexity.'
- pubmed: '19884133'
- doi: 10.1093/nar/gkz890
  pubmed: '31598706'
- doi: 10.1093/nar/gkz890
  pubmed: '31598706'
  title: Ensembl Genomes 2020-enabling non-vertebrate genomic research.
- doi: 10.1093/nar/gkv1209
  pubmed: '26578574'
  title: 'Ensembl Genomes 2016: more genomes, more complexity.'
- pubmed: '19884133'
- doi: 10.1093/nar/gkz890
  pubmed: '31598706'
re3data:
  description: This site provides access to complete, annotated genomes from bacteria
    and archaea (present in the European Nucleotide Archive) through the Ensembl graphical
    user interface (genome browser). Ensembl Bacteria contains genomes from annotated
    INSDC records that are loaded into Ensembl multi-species databases, using the
    INSDC annotation import pipeline.
  homepage: http://bacteria.ensembl.org/index.html
  name: Ensembl Bacteria
  prefix: r3d100011195
  synonyms:
  - e!EnsemblBacteria
  xrefs:
    fairsharing: FAIRsharing.zsgmvd
    miriam: '00000202'
    nif: 0000-33711
    scr: 008679
uniprot:
  abbreviation: EnsemblBacteria
  category: Genome annotation databases
  homepage: https://bacteria.ensembl.org/
  name: Ensembl bacterial and archaeal genome annotation project
  prefix: DB-0147
  publications:
  - doi: 10.1093/nar/gkz890
    pubmed: '31598706'
  uri_format: https://www.ensemblgenomes.org/id/$1