appears_in: [] depends_on: [] deprecated: false description: AphidBase is a centralized bioinformatic resource that was developed to facilitate community annotation of the pea aphid genome by the International Aphid Genomics Consortium (IAGC). The AphidBase Information System was designed to organize and distribute genomic data and annotations for a large international community. This collection references the transcript report, which describes genomic location, sequence and exon information. example: ACYPI000159 homepage: http://www.aphidbase.com/aphidbase keywords: - genome mappings: biocontext: APHIDBASE.TRANSCRIPT miriam: aphidbase.transcript n2t: aphidbase.transcript prefixcommons: aphidbase name: AphidBase Transcript namespace_in_lui: false pattern: ^ACYPI\d{6}(-RA)?$ preferred_prefix: aphidbase.transcript prefix: aphidbase.transcript providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/aphidbase:$1 publications: - doi: 10.1111/j.1365-2583.2009.00930.x pmc: PMC4372297 pubmed: '20482635' title: 'AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome' year: 2010 synonyms: [] uri_format: http://bipaa.genouest.org/apps/grs-2.3/grs?reportID=aphidbase_transcript_report&objectID=$1