CHEBI:15956 - biotin

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name biotin
ChEBI ID CHEBI:15956
Definition An organic heterobicyclic compound that consists of 2-oxohexahydro-1H-thieno[3,4-d]imidazole having a valeric acid substituent attached to the tetrahydrothiophene ring. The parent of the class of biotins.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:41236, CHEBI:13905, CHEBI:22882, CHEBI:22884, CHEBI:3108
Supplier Information ChemicalBook:CB3271542, eMolecules:1970569, eMolecules:481810, Selleckchem:biotin-vitamin-b7, ZINC000035024346
Download Molfile XML SDF
more structures >>
Wikipedia License
Biotin (also known as vitamin B7 or vitamin H) is one of the B vitamins. It is involved in a wide range of metabolic processes, both in humans and in other organisms, primarily related to the utilization of fats, carbohydrates, and amino acids. The name biotin, borrowed from the German Biotin, derives from the Ancient Greek word βίοτος (bíotos; 'life') and the suffix "-in" (a suffix used in chemistry usually to indicate 'forming'). Biotin appears as a white, needle-like crystalline solid.
Read full article at Wikipedia
Formula C10H16N2O3S
Net Charge 0
Average Mass 244.31172
Monoisotopic Mass 244.08816
InChI InChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/t6-,7-,9-/m0/s1
InChIKey YBJHBAHKTGYVGT-ZKWXMUAHSA-N
SMILES [H][C@]12CS[C@@H](CCCCC(O)=O)[C@@]1([H])NC(=O)N2
Metabolite of Species Details
Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Homo sapiens (NCBI:txid9606) Found in saliva (UBERON:0001836). See: Sugimoto et al. (2013) Physiological and environmental parameters associated with mass spectrometry-based salivary metabolomic profiles.
Homo sapiens (NCBI:txid9606) Found in cerebrospinal fluid (UBERON:0001359). See: PubMed
Homo sapiens (NCBI:txid9606) Found in blood (UBERON:0000178). See: Geigy Scientific Tables, 8th Rev edition, pp. 130. Edited by C. Lentner, West Cadwell, N.J.: Medical education Div., Ciba-Geigy Corp. Basel, Switzerland c1981-1992.
Homo sapiens (NCBI:txid9606) Found in urine (BTO:0001419). See: Geigy Scientific Tables, 8th Rev edition, pp. 130. Edited by C. Lentner, West Cadwell, N.J.: Medical education Div., Ciba-Geigy Corp. Basel, Switzerland c1981-1992.
Homo sapiens (NCBI:txid9606) From MetaboLights See: MetaboLights Study
Roles Classification
Chemical Role(s): Bronsted acid
A molecular entity capable of donating a hydron to an acceptor (Bronsted base).
(via oxoacid )
Biological Role(s): prosthetic group
A tightly bound, specific nonpolypeptide unit in a protein determining and involved in its biological activity.
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
cofactor
An organic molecule or ion (usually a metal ion) that is required by an enzyme for its activity. It may be attached either loosely (coenzyme) or tightly (prosthetic group).
fundamental metabolite
Any metabolite produced by all living cells.
coenzyme
A low-molecular-weight, non-protein organic compound participating in enzymatic reactions as dissociable acceptor or donor of chemical groups or electrons.
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
water-soluble vitamin (role)
Any vitamin that dissolves in water and readily absorbed into tissues for immediate use. Unlike the fat-soluble vitamins, they are not stored in the body and need to be replenished regularly in the diet and will rarely accumulate to toxic levels since they are quickly excreted from the body via urine.
(via B vitamin )
Application(s): nutraceutical
A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance.
(via B vitamin )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing biotin (CHEBI:15956) has role Escherichia coli metabolite (CHEBI:76971)
biotin (CHEBI:15956) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
biotin (CHEBI:15956) has role coenzyme (CHEBI:23354)
biotin (CHEBI:15956) has role cofactor (CHEBI:23357)
biotin (CHEBI:15956) has role fundamental metabolite (CHEBI:78675)
biotin (CHEBI:15956) has role human metabolite (CHEBI:77746)
biotin (CHEBI:15956) has role mouse metabolite (CHEBI:75771)
biotin (CHEBI:15956) has role nutraceutical (CHEBI:50733)
biotin (CHEBI:15956) has role prosthetic group (CHEBI:26348)
biotin (CHEBI:15956) is a biotins (CHEBI:51570)
biotin (CHEBI:15956) is a vitamin B7 (CHEBI:176841)
biotin (CHEBI:15956) is conjugate acid of biotinate (CHEBI:57586)
Incoming biocytin (CHEBI:27870) has functional parent biotin (CHEBI:15956)
biotin amide (CHEBI:16615) has functional parent biotin (CHEBI:15956)
biotinyl-5'-AMP (CHEBI:3110) has functional parent biotin (CHEBI:15956)
biotinyl-CoA (CHEBI:15516) has functional parent biotin (CHEBI:15956)
GCB (CHEBI:74858) has functional parent biotin (CHEBI:15956)
vitamin B complex (CHEBI:75782) has part biotin (CHEBI:15956)
biotinate (CHEBI:57586) is conjugate base of biotin (CHEBI:15956)
biotinyl group (CHEBI:22885) is substituent group from biotin (CHEBI:15956)
IUPAC Name
5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid
INNs Sources
biotin WHO MedNet
biotina WHO MedNet
biotine WHO MedNet
biotinum WHO MedNet
Synonyms Sources
(+)-cis-Hexahydro-2-oxo-1H-thieno[3,4]imidazole-4-valeric acid HMDB
(3aS,4S,6aR)-Hexahydro-2-oxo-1H-thieno[3,4-d]imidazole-4-valeric acid HMDB
5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanoic acid HMDB
BIOTIN PDBeChem
cis-(+)-Tetrahydro-2-oxothieno[3,4]imidazoline-4-valeric acid HMDB
cis-Hexahydro-2-oxo-1H-thieno(3,4)imidazole-4-valeric acid HMDB
cis-Tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid HMDB
Coenzyme R KEGG COMPOUND
D-(+)-biotin NIST Chemistry WebBook
D-Biotin KEGG COMPOUND
vitamin B7 NIST Chemistry WebBook
Vitamin H KEGG COMPOUND
Manual Xrefs Databases
149962 ChemSpider
373 DrugCentral
Biotin Wikipedia
BIOTIN MetaCyc
BTN PDBeChem
C00000756 KNApSAcK
C00120 KEGG COMPOUND
D00029 KEGG DRUG
DB00121 DrugBank
FDB014510 FooDB
HMDB0000030 HMDB
LSM-3994 LINCS
MOL000144 COMe
View more database links
Registry Numbers Types Sources
1918703 Gmelin Registry Number Gmelin
58-85-5 CAS Registry Number KEGG COMPOUND
58-85-5 CAS Registry Number ChemIDplus
58-85-5 CAS Registry Number NIST Chemistry WebBook
86838 Reaxys Registry Number Reaxys
Citations
Ramamoorthy K, Sabui S, Srinivasan P, Al-Juburi S, Pham Q, Chu BD, Simoes RD, Fleckenstein JM, Said HM (2021)
Effect of chronic alcohol exposure on gut vitamin B7 uptake: involvement of epigenetic mechanisms and effect of alcohol metabolites.
American journal of physiology. Gastrointestinal and liver physiology 321, G123-G133 [PubMed:34077272]
[show Abstract]
Motahari H, Thumma S, Menon L (2021)
Biotin Supplementation Creates the Misleading Diagnosis of Secondary Adrenal Insufficiency
Journal of the Endocrine Society 5, A120-A121 [PubMed Central:PMC8089577]
[show Abstract]
Weimann A, Plomgaard P, Hilsted LM, Poulsen HE, Larsen EL (2021)
Quantification of biotin in plasma samples by column switching liquid chromatography - tandem mass spectrometry.
Scandinavian journal of clinical and laboratory investigation 81, 127-136 [PubMed:33461365]
[show Abstract]
Lipner SR (2020)
Update on Biotin Therapy in Dermatology: Time for a Change.
Journal of drugs in dermatology : JDD 19, 1264-1265 [PubMed:33346513]
[show Abstract]
Nunomura S, Ohtsubo-Yoshioka M, Okayama Y, Terui T, Ra C (2015)
FcRγ promotes contact hypersensitivity to oxazolone without affecting the contact sensitisation process in B6 mice.
Experimental dermatology 24, 204-208 [PubMed:25515858]
[show Abstract]
Zempleni J, Teixeira DC, Kuroishi T, Cordonier EL, Baier S (2012)
Biotin requirements for DNA damage prevention.
Mutation research 733, 58-60 [PubMed:21871906]
[show Abstract]
Larrieta E, Vega-Monroy ML, Vital P, Aguilera A, German MS, Hafidi ME, Fernandez-Mejia C (2012)
Effects of biotin deficiency on pancreatic islet morphology, insulin sensitivity and glucose homeostasis.
The Journal of nutritional biochemistry 23, 392-399 [PubMed:21596550]
[show Abstract]
Zhou J, Wang D, Schlegel V, Zempleni J (2011)
Development of an internet based system for modeling biotin metabolism using Bayesian networks.
Computer methods and programs in biomedicine 104, 254-259 [PubMed:21356565]
[show Abstract]
Yu J, Niu C, Wang D, Li M, Teo W, Sun G, Wang J, Liu J, Liu J, Gao Q (2011)
MMAR_2770, a new enzyme involved in biotin biosynthesis, is essential for the growth of Mycobacterium marinum in macrophages and zebrafish.
Microbes and infection 13, 33-41 [PubMed:20974274]
[show Abstract]
Plażuk D, Zakrzewski J, Salmain M (2011)
Biotin as acylating agent in the Friedel-Crafts reaction. Avidin affinity of biotinyl derivatives of ferrocene, ruthenocene and pyrene and fluorescence properties of 1-biotinylpyrene.
Organic & biomolecular chemistry 9, 408-417 [PubMed:20967359]
[show Abstract]
Rizzi L, Braschi M, Colombo M, Vaiana N, Tibolla G, Norata GD, Catapano AL, Romeo S, Prosperi D (2011)
Novel biotinylated bile acid amphiphiles: micellar aggregates formation and interaction with hepatocytes.
Organic & biomolecular chemistry 9, 2899-2905 [PubMed:21373679]
[show Abstract]
Stratton SL, Horvath TD, Bogusiewicz A, Matthews NI, Henrich CL, Spencer HJ, Moran JH, Mock DM (2011)
Urinary excretion of 3-hydroxyisovaleryl carnitine is an early and sensitive indicator of marginal biotin deficiency in humans.
The Journal of nutrition 141, 353-358 [PubMed:21248194]
[show Abstract]
Pratesi A, Bucelli F, Mori I, Chinol M, Verdoliva A, Paganelli G, Rivieccio V, Gariboldi L, Ginanneschi M (2010)
Biotin derivatives carrying two chelating DOTA units. Synthesis, in vitro evaluation of biotinidases resistance, avidin binding, and radiolabeling tests.
Journal of medicinal chemistry 53, 432-440 [PubMed:19928962]
[show Abstract]
Zempleni J, Wijeratne SS, Hassan YI (2009)
Biotin.
BioFactors (Oxford, England) 35, 36-46 [PubMed:19319844]
[show Abstract]
Sreekumar A, Poisson LM, Rajendiran TM, Khan AP, Cao Q, Yu J, Laxman B, Mehra R, Lonigro RJ, Li Y, Nyati MK, Ahsan A, Kalyana-Sundaram S, Han B, Cao X, Byun J, Omenn GS, Ghosh D, Pennathur S, Alexander DC, Berger A, Shuster JR, Wei JT, Varambally S, Beecher C, Chinnaiyan AM (2009)
Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression.
Nature 457, 910-914 [PubMed:19212411]
[show Abstract]
Taniguchi A, Watanabe T (2008)
Transplacental transport and tissue distribution of biotin in mice at midgestation.
Congenital anomalies 48, 57-62 [PubMed:18452485]
[show Abstract]
Zempleni J, Hassan YI, Wijeratne SS (2008)
Biotin and biotinidase deficiency.
Expert review of endocrinology & metabolism 3, 715-724 [PubMed:19727438]
[show Abstract]
Purushothaman S, Gupta G, Srivastava R, Ramu VG, Surolia A (2008)
Ligand specificity of group I biotin protein ligase of Mycobacterium tuberculosis.
PloS one 3, e2320 [PubMed:18509457]
[show Abstract]
Ferreira G, Weiss WP (2007)
Effect of biotin on activity and gene expression of biotin-dependent carboxylases in the liver of dairy cows.
Journal of dairy science 90, 1460-1466 [PubMed:17297119]
[show Abstract]
Taniguchi A, Watanabe T (2007)
Roles of biotin in growing ovarian follicles and embryonic development in domestic fowl.
Journal of nutritional science and vitaminology 53, 457-463 [PubMed:18202531]
[show Abstract]
Hong YR, Chen YL, Farh L, Yang WJ, Liao CH, Shiuan D (2006)
Recombinant Candida utilis for the production of biotin.
Applied microbiology and biotechnology 71, 211-221 [PubMed:16195795]
[show Abstract]
Bingham JP, Bian S, Tan ZY, Takacs Z, Moczydlowski E (2006)
Synthesis of a biotin derivative of iberiotoxin: binding interactions with streptavidin and the BK Ca2+-activated K+ channel expressed in a human cell line.
Bioconjugate chemistry 17, 689-699 [PubMed:16704206]
[show Abstract]
Revilla-Monsalve C, Zendejas-Ruiz I, Islas-Andrade S, Báez-Saldaña A, Palomino-Garibay MA, Hernández-Quiróz PM, Fernandez-Mejia C (2006)
Biotin supplementation reduces plasma triacylglycerol and VLDL in type 2 diabetic patients and in nondiabetic subjects with hypertriglyceridemia.
Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 60, 182-185 [PubMed:16677798]
[show Abstract]
Seki M (2006)
Biological significance and development of practical synthesis of biotin.
Medicinal research reviews 26, 434-482 [PubMed:16676358]
[show Abstract]
Bhor VM, Dev S, Vasanthakumar GR, Kumar P, Sinha S, Surolia A (2006)
Broad substrate stereospecificity of the Mycobacterium tuberculosis 7-keto-8-aminopelargonic acid synthase: Spectroscopic and kinetic studies.
The Journal of biological chemistry 281, 25076-25088 [PubMed:16769720]
[show Abstract]
Zempleni J (2005)
Uptake, localization, and noncarboxylase roles of biotin.
Annual review of nutrition 25, 175-196 [PubMed:16011464]
[show Abstract]
Holmberg A, Blomstergren A, Nord O, Lukacs M, Lundeberg J, Uhlén M (2005)
The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures.
Electrophoresis 26, 501-510 [PubMed:15690449]
[show Abstract]
Guillén-Navarro K, Encarnación S, Dunn MF (2005)
Biotin biosynthesis, transport and utilization in rhizobia.
FEMS microbiology letters 246, 159-165 [PubMed:15899401]
[show Abstract]
Vilches-Flores A, Fernández-Mejía C (2005)
[Effect of biotin upon gene expression and metabolism].
Revista de investigacion clinica; organo del Hospital de Enfermedades de la Nutricion 57, 716-724 [PubMed:16419467]
[show Abstract]
Fujimoto W, Inaoki M, Fukui T, Inoue Y, Kuhara T (2005)
Biotin deficiency in an infant fed with amino acid formula.
The Journal of dermatology 32, 256-261 [PubMed:15863846]
[show Abstract]
Gravel RA, Narang MA (2005)
Molecular genetics of biotin metabolism: old vitamin, new science.
The Journal of nutritional biochemistry 16, 428-431 [PubMed:15992684]
[show Abstract]
Ginzberg I, Perl A, Genser M, Wininger S, Nemas C, Kapulnik Y (2004)
Expression of streptavidin in tomato resulted in abnormal plant development that could be restored by biotin application.
Journal of plant physiology 161, 611-620 [PubMed:15202718]
[show Abstract]
Kim HS, Hoja U, Stolz J, Sauer G, Schweizer E (2004)
Identification of the tRNA-binding protein Arc1p as a novel target of in vivo biotinylation in Saccharomyces cerevisiae.
The Journal of biological chemistry 279, 42445-42452 [PubMed:15272000]
[show Abstract]
Harthé C, Claustrat B (2003)
A sensitive and practical competitive radioassay for plasma biotin.
Annals of clinical biochemistry 40, 259-263 [PubMed:12803839]
[show Abstract]
Grafe F, Wohlrab W, Neubert RH, Brandsch M (2003)
Transport of biotin in human keratinocytes.
The Journal of investigative dermatology 120, 428-433 [PubMed:12603856]
[show Abstract]
McMahon RJ (2002)
Biotin in metabolism and molecular biology.
Annual review of nutrition 22, 221-239 [PubMed:12055344]
[show Abstract]
Mardach R, Zempleni J, Wolf B, Cannon MJ, Jennings ML, Cress S, Boylan J, Roth S, Cederbaum S, Mock DM (2002)
Biotin dependency due to a defect in biotin transport.
The Journal of clinical investigation 109, 1617-1623 [PubMed:12070309]
[show Abstract]
Fiume MZ, Cosmetic Ingredient Review Expert Panel (2001)
Final report on the safety assessment of biotin.
International journal of toxicology 20 Suppl 4, 1-12 [PubMed:11800048]
[show Abstract]
Rodríguez-Meléndez R, Cano S, Méndez ST, Velázquez A (2001)
Biotin regulates the genetic expression of holocarboxylase synthetase and mitochondrial carboxylases in rats.
The Journal of nutrition 131, 1909-1913 [PubMed:11435506]
[show Abstract]
Mock DM, Nyalala JO, Raguseo RM (2001)
A direct streptavidin-binding assay does not accurately quantitate biotin in human urine.
The Journal of nutrition 131, 2208-2214 [PubMed:11481419]
[show Abstract]
Alban C, Job D, Douce R (2000)
BIOTIN METABOLISM IN PLANTS.
Annual review of plant physiology and plant molecular biology 51, 17-47 [PubMed:15012185]
[show Abstract]
Anagnostouli M, Livaniou E, Nyalala JO, Evangelatos G, Zournas C, Ithakissios DS, Papageorgiou C (1999)
Cerebrospinal fluid levels of biotin in various neurological disorders.
Acta neurologica Scandinavica 99, 387-392 [PubMed:10577274]
[show Abstract]
Thuy LP, Belmont J, Nyhan WL (1999)
Prenatal diagnosis and treatment of holocarboxylase synthetase deficiency.
Prenatal diagnosis 19, 108-112 [PubMed:10215065]
[show Abstract]
Mock DM (1999)
Biotin status: which are valid indicators and how do we know?
The Journal of nutrition 129, 498S-503S [PubMed:10064317]
[show Abstract]
Bussolati G, Gugliotta P, Volante M, Pace M, Papotti M (1997)
Retrieved endogenous biotin: a novel marker and a potential pitfall in diagnostic immunohistochemistry.
Histopathology 31, 400-407 [PubMed:9416479]
[show Abstract]
Mock DM, Stadler DD (1997)
Conflicting indicators of biotin status from a cross-sectional study of normal pregnancy.
Journal of the American College of Nutrition 16, 252-257 [PubMed:9176832]
[show Abstract]
Mock DM, Dyken ME (1997)
Biotin catabolism is accelerated in adults receiving long-term therapy with anticonvulsants.
Neurology 49, 1444-1447 [PubMed:9371938]
[show Abstract]
Zempleni J, McCormick DB, Mock DM (1997)
Identification of biotin sulfone, bisnorbiotin methyl ketone, and tetranorbiotin-l-sulfoxide in human urine.
The American journal of clinical nutrition 65, 508-511 [PubMed:9022537]
[show Abstract]
Mock NI, Malik MI, Stumbo PJ, Bishop WP, Mock DM (1997)
Increased urinary excretion of 3-hydroxyisovaleric acid and decreased urinary excretion of biotin are sensitive early indicators of decreased biotin status in experimental biotin deficiency.
The American journal of clinical nutrition 65, 951-958 [PubMed:9094878]
[show Abstract]
Mock DM, Heird GM (1997)
Urinary biotin analogs increase in humans during chronic supplementation: the analogs are biotin metabolites.
The American journal of physiology 272, E83-5 [PubMed:9038855]
[show Abstract]
Mock DM, Stadler DD, Stratton SL, Mock NI (1997)
Biotin status assessed longitudinally in pregnant women.
The Journal of nutrition 127, 710-716 [PubMed:9164991]
[show Abstract]
Limat A, Suormala T, Hunziker T, Waelti ER, Braathen LR, Baumgartner R (1996)
Proliferation and differentiation of cultured human follicular keratinocytes are not influenced by biotin.
Archives of dermatological research 288, 31-38 [PubMed:8750932]
[show Abstract]
Schenker S, Hu ZQ, Johnson RF, Yang Y, Frosto T, Elliott BD, Henderson GI, Mock DM (1993)
Human placental biotin transport: normal characteristics and effect of ethanol.
Alcoholism, clinical and experimental research 17, 566-575 [PubMed:8333586]
[show Abstract]
Thuy LP, Sweetman L, Nyhan WL (1991)
A new immunochemical assay for biotin.
Clinica chimica acta; international journal of clinical chemistry 202, 191-197 [PubMed:1814646]
[show Abstract]
Bigham SL, Ballard JD, Giles KD, Clelland CS, Jeffcoat R, Griffin KS, Farley TD, Bushman DR, Wright JR (1990)
Synthesis and possible applications of biotin-linked copper clusters.
Physiological chemistry and physics and medical NMR 22, 63-72 [PubMed:2100006]
[show Abstract]
Last Modified
22 July 2021