Phytozome is a project to facilitate comparative genomic studies amongst green plants. Famlies of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. This collection references locus information.
phytozome.locus
Local identifiers in Plant Genome Network should match this
regular expression:
^[A-Za-z0-9]+$
Compact URIs (CURIEs) constructed from Plant Genome Network should match
this regular expression:
^phytozome\.locus:[A-Za-z0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PHYTOZOME.LOCUS
|
|
Identifiers.org | miriam |
phytozome.locus
|
|
N2T | n2t |
phytozome.locus
|
|
NCBI | ncbi |
Phytozome
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier Glyma0021s00410
is used to demonstrate the providers
available for Plant Genome Network. A guide for curating additional providers can be found
here.