The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. This collection references groups of genes that have been organised as families.

Prefix
panther.family
Keywords
classification gene ontology pathway protein
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in PANTHER Family should match this regular expression:
^PTHR\d{5}(\:SF\d{1,3})?$

Example Local Unique Identifier
PTHR12345   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from PANTHER Family should match this regular expression:
^panther\.family:PTHR\d{5}(\:SF\d{1,3})?$

Example CURIE
panther.family:PTHR12345
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Part Of (bfo:0000050 )
panther (not directly registered)
In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry PANTHER Family

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PANTHER.FAMILY
Biolink Biolink Model Registry logo biolink PANTHER.FAMILY
GO Gene Ontology Registry logo go PANTHER
Identifiers.org Identifiers.org logo miriam panther.family
N2T Name-to-Thing logo n2t panther.family
Prefix Commons Prefix Commons logo prefixcommons panther
UniProt UniProt Cross-ref database logo uniprot DB-0069
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE panther.family:PTHR12345 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
PANTHER Family panther.family http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12345
Bioregistry bioregistry https://bioregistry.io/panther.family:PTHR12345
Identifiers.org miriam https://identifiers.org/panther.family:PTHR12345
Name-to-Thing n2t https://n2t.net/panther.family:PTHR12345
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/panther:PTHR12345