The EBI Metagenomics service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. Metagenomics is the study of all genomes present in any given environment without the need for prior individual identification or amplification. This collection references samples.

Prefix

mgnify.samp

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in MGnify Sample should match this regular expression:
^[A-Z]+[0-9]+$

Example Local Unique Identifier

SRS086444   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from MGnify Sample should match this regular expression:
^mgnify\.samp:[A-Z]+[0-9]+$

Example CURIE

mgnify.samp:SRS086444

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 1 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE mgnify.samp:SRS086444 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.